RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 KRCC1Q9NPI7 259 aaPredicted RBP12.34□□□□□ -0.43
TMEM260-201ENST00000261556 PURGQ9UJV8 347 aaKnown RBP12.34□□□□□ -0.43
TMEM260-201ENST00000261556 FZD10Q9ULW2 581 aa12.34□□□□□ -0.43
TMEM260-201ENST00000261556 ARID1BQ8NFD5 2236 aaPredicted RBP12.33□□□□□ -0.43
TMEM260-201ENST00000261556 SOX15O60248 233 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 CDC40O60508 579 aaKnown RBP eCLIP12.33□□□□□ -0.44
TMEM260-201ENST00000261556 RAB3DO95716 219 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 ETV6P41212 452 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 AP1S1P61966 158 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 GPM6BQ13491 265 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 RCAN2Q14206 197 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 SF1Q15637 639 aaKnown RBP12.33□□□□□ -0.44
TMEM260-201ENST00000261556 SLC5A12Q1EHB4 618 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 FBXL22Q6P050 247 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 CCDC71Q8IV32 467 aaPredicted RBP12.33□□□□□ -0.44
TMEM260-201ENST00000261556 BVESQ8NE79 360 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 HSPA12BQ96MM6 686 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 PCYT2Q99447 389 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 FAIM2Q9BWQ8 316 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 SEMA3GQ9NS98 782 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 ZFP57Q9NU63 452 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 GPRC5BQ9NZH0 403 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 FKBPLQ9UIM3 349 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 SIX4Q9UIU6 781 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 PCDHGB7Q9Y5F8 929 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 MPZL2O60487 215 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 RAB5CP51148 216 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 SOX4Q06945 474 aaPredicted RBP12.33□□□□□ -0.44
TMEM260-201ENST00000261556 IL10RBQ08334 325 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 ZNF79Q15937 498 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 DPYSL2Q16555 572 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 ADGRF1Q5T601 910 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 PLAG1Q6DJT9 500 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 ARL9Q6T311 187 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 QSOX2Q6ZRP7 698 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 C17orf64Q86WR6 236 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 POGLUT1Q8NBL1 392 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 WFIKKN2Q8TEU8 576 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 NXPE3Q969Y0 559 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 CYP2S1Q96SQ9 504 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 PKP4Q99569 1192 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 LRTM1Q9HBL6 345 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 HAS3O00219 553 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 OR10H2O60403 315 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 STK16O75716 305 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 PPP3CBP16298 524 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 PRDX3P30048 256 aaKnown RBP12.33□□□□□ -0.44
TMEM260-201ENST00000261556 HEPACAMQ14CZ8 416 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 TPGS2Q68CL5 300 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 SLAMF9Q96A28 289 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 C16orf70Q9BSU1 422 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 EIF2B3Q9NR50 452 aaKnown RBP12.33□□□□□ -0.44
TMEM260-201ENST00000261556 ANGPT4Q9Y264 503 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 TRAPPC4Q9Y296 219 aa12.33□□□□□ -0.44
TMEM260-201ENST00000261556 CLIC1O00299 241 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 EIF1BO60739 113 aaKnown RBP12.32□□□□□ -0.44
TMEM260-201ENST00000261556 KCNE1P15382 129 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 GNALP38405 381 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 EIF1P41567 113 aaKnown RBP12.32□□□□□ -0.44
TMEM260-201ENST00000261556 SLC11A1P49279 550 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 NKG7Q16617 165 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 UGT3A2Q3SY77 523 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 IFI44LQ53G44 452 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 ZNF789Q5FWF6 425 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 CCNJQ5T5M9 372 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 DPPA4Q7L190 304 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 OR11H4Q8NGC9 324 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 ZNF583Q96ND8 569 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 AARSD1Q9BTE6 412 aaKnown RBP12.32□□□□□ -0.44
TMEM260-201ENST00000261556 PLAC1Q9HBJ0 212 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 FAM86C1Q9NVL1 165 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 TXNL4BQ9NX01 149 aaKnown RBP12.32□□□□□ -0.44
TMEM260-201ENST00000261556 PCDHB1Q9Y5F3 818 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 A0A1W2PQ45 241 aaPredicted RBP12.32□□□□□ -0.44
TMEM260-201ENST00000261556 A0A1W2PQY0 241 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 PHOX2AO14813 284 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 MATN4O95460 622 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 ENGP17813 658 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 KIR3DL1P43629 444 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 CLDN8P56748 225 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 CD276Q5ZPR3 534 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 ZNF529Q6P280 563 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 TMEM135Q86UB9 458 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 PTRH1Q86Y79 214 aaKnown RBP12.32□□□□□ -0.44
TMEM260-201ENST00000261556 PHYKPLQ8IUZ5 450 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 INO80EQ8NBZ0 244 aaPredicted RBP12.32□□□□□ -0.44
TMEM260-201ENST00000261556 OR2T4Q8NH00 348 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 ELP5Q8TE02 316 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 ACSS1Q9NUB1 689 aaPredicted RBP12.32□□□□□ -0.44
TMEM260-201ENST00000261556 TINAGQ9UJW2 476 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 KCNIP3Q9Y2W7 256 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 BAZ2AQ9UIF9 1905 aaKnown RBP12.32□□□□□ -0.44
TMEM260-201ENST00000261556 E7EQ34 232 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 ZNF670-ZNF695F2Z2N8 137 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 GOSR2O14653 212 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 FADS1O60427 444 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 F12P00748 615 aaPredicted RBP12.32□□□□□ -0.44
TMEM260-201ENST00000261556 HLA-DPB1P04440 258 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 CPT2P23786 658 aa12.32□□□□□ -0.44
TMEM260-201ENST00000261556 SSR2P43308 183 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms