RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 OR4N2Q8NGD1 307 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 OR14L1PQ8NHC6 308 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 C11orf24Q96F05 449 aaPredicted RBP17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 VSTM2LQ96N03 204 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 BTBD9Q96Q07 612 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 GPATCH1Q9BRR8 931 aaKnown RBP17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 FOLH1BQ9HBA9 442 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 GIMAP4Q9NUV9 329 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 ZNF629Q9UEG4 869 aaPredicted RBP17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 DCDC2Q9UHG0 476 aa17.31■□□□□ 0.36
TM6SF1-201ENST00000258909 OR6C70A6NIJ9 312 aa17.3■□□□□ 0.36
TM6SF1-201ENST00000258909 CD8B2A6NJW9 211 aa17.3■□□□□ 0.36
TM6SF1-201ENST00000258909 C17orf51A8MQB3 221 aa17.3■□□□□ 0.36
TM6SF1-201ENST00000258909 ERN1O75460 977 aaKnown RBP17.3■□□□□ 0.36
TM6SF1-201ENST00000258909 CBR3O75828 277 aa17.3■□□□□ 0.36
TM6SF1-201ENST00000258909 BCAS2O75934 225 aaPredicted RBP17.3■□□□□ 0.36
TM6SF1-201ENST00000258909 ART1P52961 327 aa17.3■□□□□ 0.36
TM6SF1-201ENST00000258909 C2orf80Q0P641 193 aa17.3■□□□□ 0.36
TM6SF1-201ENST00000258909 SF3B4Q15427 424 aaKnown RBP eCLIP17.3■□□□□ 0.36
TM6SF1-201ENST00000258909 ERCC6LQ2NKX8 1250 aa17.3■□□□□ 0.36
TM6SF1-201ENST00000258909 SPNS3Q6ZMD2 512 aa17.3■□□□□ 0.36
TM6SF1-201ENST00000258909 C9orf106Q8NAJ2 232 aa17.3■□□□□ 0.36
TM6SF1-201ENST00000258909 RNASE6Q93091 150 aaKnown RBP17.3■□□□□ 0.36
TM6SF1-201ENST00000258909 TMCO6Q96DC7 493 aa17.3■□□□□ 0.36
TM6SF1-201ENST00000258909 BBS4Q96RK4 519 aa17.3■□□□□ 0.36
TM6SF1-201ENST00000258909 POLDIP3Q9BY77 421 aaKnown RBP17.3■□□□□ 0.36
TM6SF1-201ENST00000258909 C12orf65Q9H3J6 166 aaKnown RBP17.3■□□□□ 0.36
TM6SF1-201ENST00000258909 LIME1Q9H400 295 aa17.3■□□□□ 0.36
TM6SF1-201ENST00000258909 SENP1Q9P0U3 644 aa17.3■□□□□ 0.36
TM6SF1-201ENST00000258909 FETUBQ9UGM5 382 aa17.3■□□□□ 0.36
TM6SF1-201ENST00000258909 FBXL2Q9UKC9 423 aa17.3■□□□□ 0.36
TM6SF1-201ENST00000258909 CCDC151A5D8V7 595 aa17.29■□□□□ 0.36
TM6SF1-201ENST00000258909 TSPAN2O60636 221 aa17.29■□□□□ 0.36
TM6SF1-201ENST00000258909 ACTL6AO96019 429 aa17.29■□□□□ 0.36
TM6SF1-201ENST00000258909 SHBGP04278 402 aa17.29■□□□□ 0.36
TM6SF1-201ENST00000258909 JUNP05412 331 aaKnown RBP17.29■□□□□ 0.36
TM6SF1-201ENST00000258909 MYL2P10916 166 aa17.29■□□□□ 0.36
TM6SF1-201ENST00000258909 STARP49675 285 aa17.29■□□□□ 0.36
TM6SF1-201ENST00000258909 GALNT18Q6P9A2 607 aa17.29■□□□□ 0.36
TM6SF1-201ENST00000258909 ZYG11AQ6WRX3 759 aa17.29■□□□□ 0.36
TM6SF1-201ENST00000258909 LARP4Q71RC2 724 aaKnown RBP eCLIP17.29■□□□□ 0.36
TM6SF1-201ENST00000258909 PLCZ1Q86YW0 608 aa17.29■□□□□ 0.36
TM6SF1-201ENST00000258909 SLC44A2Q8IWA5 706 aaPredicted RBP17.29■□□□□ 0.36
TM6SF1-201ENST00000258909 TRIM42Q8IWZ5 723 aa17.29■□□□□ 0.36
TM6SF1-201ENST00000258909 FAM9CQ8IZT9 166 aa17.29■□□□□ 0.36
TM6SF1-201ENST00000258909 EFHD2Q96C19 240 aaPredicted RBP17.29■□□□□ 0.36
TM6SF1-201ENST00000258909 SLC35A4Q96G79 324 aa17.29■□□□□ 0.36
TM6SF1-201ENST00000258909 TUBA1CQ9BQE3 449 aa17.29■□□□□ 0.36
TM6SF1-201ENST00000258909 SHCBP1LQ9BZQ2 653 aa17.29■□□□□ 0.36
TM6SF1-201ENST00000258909 OR2B2Q9GZK3 357 aa17.29■□□□□ 0.36
TM6SF1-201ENST00000258909 TNFRSF12AQ9NP84 129 aa17.29■□□□□ 0.36
TM6SF1-201ENST00000258909 POLR3HQ9Y535 204 aaPredicted RBP17.29■□□□□ 0.36
TM6SF1-201ENST00000258909 MBD3L4A6NDZ8 208 aaPredicted RBP17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 MBD3L3A6NE82 208 aaPredicted RBP17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 MBD3L5A6NJ08 208 aaPredicted RBP17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 SMIM23A6NLE4 172 aa17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 CYP4B1P13584 511 aa17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 IL12BP29460 328 aa17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 MPIP34949 423 aa17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 GCKP35557 465 aa17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 KRT20P35900 424 aa17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 IST1P53990 364 aa17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 FOXF2Q12947 444 aa17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 RCAN2Q14206 197 aa17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 CEBPEQ15744 281 aa17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 IMPG1Q17R60 797 aa17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 SH2D4BQ5SQS7 431 aa17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 SAMD14Q8IZD0 417 aaPredicted RBP17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 MBD3L2Q8NHZ7 208 aaPredicted RBP17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 ERP27Q96DN0 273 aa17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 TAS2R10Q9NYW0 307 aa17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 WIF1Q9Y5W5 379 aa17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 PRRC2AP48634 2157 aaKnown RBP17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 ZFHX3Q15911 3703 aa17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 MED12LQ86YW9 2145 aa17.28■□□□□ 0.36
TM6SF1-201ENST00000258909 SERTM1A2A2V5 107 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 B4DXG7 233 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 EEF1E1-BLOC1S5C9J1V9 151 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 H0Y3Z8 333 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 EEF1E1O43324 174 aaKnown RBP17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 PLOD3O60568 738 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 GLRA3O75311 464 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 PROCP04070 461 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 DDCP20711 480 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 TACR1P25103 407 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 CTSSP25774 331 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 NCBP2P52298 156 aaKnown RBP eCLIP17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 DGKQP52824 942 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 ZNF763Q0D2J5 394 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 ZNF155Q12901 538 aaPredicted RBP17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 FBXL19-AS1Q494R0 122 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 FLYWCH1Q4VC44 716 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 SH2D5Q6ZV89 423 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 IFNEQ86WN2 208 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 ZPLD1Q8TCW7 415 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 LRRC46Q96FV0 321 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 CLEC4MQ9H2X3 399 aaPredicted RBP17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 CALHM2Q9HA72 323 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 SIRT5Q9NXA8 310 aa17.27■□□□□ 0.36
TM6SF1-201ENST00000258909 TAS2R9Q9NYW1 312 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms