RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 MGAT2Q10469 447 aa25.84■■□□□ 1.73
CCM2-201ENST00000258781 MAD2L1BPQ15013 274 aaPredicted RBP25.84■■□□□ 1.73
CCM2-201ENST00000258781 ZBED5Q49AG3 693 aa25.84■■□□□ 1.73
CCM2-201ENST00000258781 ZNF311Q5JNZ3 666 aa25.84■■□□□ 1.73
CCM2-201ENST00000258781 GPR141Q7Z602 305 aa25.84■■□□□ 1.73
CCM2-201ENST00000258781 CNIH3Q8TBE1 160 aa25.84■■□□□ 1.73
CCM2-201ENST00000258781 SLC9A6Q92581 669 aa25.84■■□□□ 1.73
CCM2-201ENST00000258781 ARRDC1-AS1Q9H2J1 176 aa25.84■■□□□ 1.73
CCM2-201ENST00000258781 A4GNTQ9UNA3 340 aa25.84■■□□□ 1.73
CCM2-201ENST00000258781 MRPS33Q9Y291 106 aaKnown RBP25.84■■□□□ 1.73
CCM2-201ENST00000258781 TRBV4-1A0A0J9YWV2 114 aa25.83■■□□□ 1.73
CCM2-201ENST00000258781 ARHGAP33O14559 1287 aa25.83■■□□□ 1.73
CCM2-201ENST00000258781 ANGPTL1O95841 491 aa25.83■■□□□ 1.73
CCM2-201ENST00000258781 MPLP40238 635 aa25.83■■□□□ 1.73
CCM2-201ENST00000258781 COL9A2Q14055 689 aaPredicted RBP25.83■■□□□ 1.73
CCM2-201ENST00000258781 DUSP5Q16690 384 aa25.83■■□□□ 1.73
CCM2-201ENST00000258781 FGD3Q5JSP0 725 aa25.83■■□□□ 1.73
CCM2-201ENST00000258781 DHRS4L2Q6PKH6 230 aa25.83■■□□□ 1.73
CCM2-201ENST00000258781 KCTD8Q6ZWB6 473 aa25.83■■□□□ 1.73
CCM2-201ENST00000258781 WDR53Q7Z5U6 358 aaPredicted RBP25.83■■□□□ 1.73
CCM2-201ENST00000258781 CDRT4Q8N9R6 151 aa25.83■■□□□ 1.73
CCM2-201ENST00000258781 AQP11Q8NBQ7 271 aa25.83■■□□□ 1.73
CCM2-201ENST00000258781 SIMC1Q8NDZ2 872 aa25.83■■□□□ 1.73
CCM2-201ENST00000258781 CTHRC1Q96CG8 243 aa25.83■■□□□ 1.73
CCM2-201ENST00000258781 AHCYL2Q96HN2 611 aaKnown RBP25.83■■□□□ 1.73
CCM2-201ENST00000258781 ARHGDIGQ99819 225 aa25.83■■□□□ 1.73
CCM2-201ENST00000258781 VCX3AQ9NNX9 186 aa25.83■■□□□ 1.73
CCM2-201ENST00000258781 UNC13CQ8NB66 2214 aa25.83■■□□□ 1.73
CCM2-201ENST00000258781 IGHV1OR21-1A0A087WYE8 117 aa25.83■■□□□ 1.72
CCM2-201ENST00000258781 FITM1A5D6W6 292 aa25.83■■□□□ 1.72
CCM2-201ENST00000258781 NME6O75414 186 aaPredicted RBP25.83■■□□□ 1.72
CCM2-201ENST00000258781 UGT2B17O75795 530 aa25.83■■□□□ 1.72
CCM2-201ENST00000258781 CPNE6O95741 557 aa25.83■■□□□ 1.72
CCM2-201ENST00000258781 PAX7P23759 505 aa25.83■■□□□ 1.72
CCM2-201ENST00000258781 PRKAR1BP31321 381 aa25.83■■□□□ 1.72
CCM2-201ENST00000258781 TTKP33981 857 aa25.83■■□□□ 1.72
CCM2-201ENST00000258781 GGT2P36268 569 aa25.83■■□□□ 1.72
CCM2-201ENST00000258781 GPR3P46089 330 aa25.83■■□□□ 1.72
CCM2-201ENST00000258781 PDX1P52945 283 aa25.83■■□□□ 1.72
CCM2-201ENST00000258781 EMP3P54852 163 aa25.83■■□□□ 1.72
CCM2-201ENST00000258781 DCST1Q5T197 706 aa25.83■■□□□ 1.72
CCM2-201ENST00000258781 NKAIN2Q5VXU1 208 aa25.83■■□□□ 1.72
CCM2-201ENST00000258781 TCEAL6Q6IPX3 200 aa25.83■■□□□ 1.72
CCM2-201ENST00000258781 NR4A3Q92570 626 aa25.83■■□□□ 1.72
CCM2-201ENST00000258781 TCEAL3Q969E4 200 aa25.83■■□□□ 1.72
CCM2-201ENST00000258781 STACQ99469 402 aa25.83■■□□□ 1.72
CCM2-201ENST00000258781 FUZQ9BT04 418 aa25.83■■□□□ 1.72
CCM2-201ENST00000258781 POLR1BQ9H9Y6 1135 aa25.83■■□□□ 1.72
CCM2-201ENST00000258781 ADAP2Q9NPF8 381 aa25.83■■□□□ 1.72
CCM2-201ENST00000258781 DUSP22Q9NRW4 184 aa25.83■■□□□ 1.72
CCM2-201ENST00000258781 CCDC160A6NGH7 325 aa25.82■■□□□ 1.72
CCM2-201ENST00000258781 ADAP00813 363 aa25.82■■□□□ 1.72
CCM2-201ENST00000258781 ALOX5P09917 674 aa25.82■■□□□ 1.72
CCM2-201ENST00000258781 JUNBP17275 347 aaPredicted RBP25.82■■□□□ 1.72
CCM2-201ENST00000258781 MLIPQ5VWP3 458 aa25.82■■□□□ 1.72
CCM2-201ENST00000258781 FRRS1Q6ZNA5 592 aa25.82■■□□□ 1.72
CCM2-201ENST00000258781 CCDC71Q8IV32 467 aaPredicted RBP25.82■■□□□ 1.72
CCM2-201ENST00000258781 ZNF595Q8IYB9 648 aa25.82■■□□□ 1.72
CCM2-201ENST00000258781 PRRC1Q96M27 445 aa25.82■■□□□ 1.72
CCM2-201ENST00000258781 QRSL1Q9H0R6 528 aaKnown RBP25.82■■□□□ 1.72
CCM2-201ENST00000258781 MTHFD2LQ9H903 347 aaPredicted RBP25.82■■□□□ 1.72
CCM2-201ENST00000258781 HCN3Q9P1Z3 774 aa25.82■■□□□ 1.72
CCM2-201ENST00000258781 GMEB2Q9UKD1 530 aa25.82■■□□□ 1.72
CCM2-201ENST00000258781 SLC13A4Q9UKG4 626 aa25.82■■□□□ 1.72
CCM2-201ENST00000258781 SATB2Q9UPW6 733 aa25.82■■□□□ 1.72
CCM2-201ENST00000258781 PCDHGA6Q9Y5G7 932 aa25.82■■□□□ 1.72
CCM2-201ENST00000258781 COMMD3-BMI1R4GMX3 469 aa25.82■■□□□ 1.72
CCM2-201ENST00000258781 RALGAPA1Q6GYQ0 2036 aa25.82■■□□□ 1.72
CCM2-201ENST00000258781 A0A1W2PRQ8 180 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 PRR33A8MZF0 331 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 H3BSA7 217 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 ZIC2O95409 532 aaPredicted RBP25.81■■□□□ 1.72
CCM2-201ENST00000258781 GLB1P16278 677 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 GSTT1P30711 240 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 OR1D5P58170 312 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 DGCR6Q14129 220 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 NR1D2Q14995 579 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 B3GNT8Q7Z7M8 397 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 OR6T1Q8NGN1 323 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 OR4C6Q8NH72 309 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 TUBA1CQ9BQE3 449 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 ENAMQ9NRM1 1142 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 IRAK4Q9NWZ3 460 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 MGAT4BQ9UQ53 548 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 IFT52Q9Y366 437 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 DUX1O43812 170 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 AVPR1BP47901 424 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 IGLV3-21P80748 117 aaPredicted RBP25.81■■□□□ 1.72
CCM2-201ENST00000258781 PROX2Q3B8N5 592 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 HMGN2P46Q86SG4 172 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 BPIFB6Q8NFQ5 453 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 FNDC11Q9BVV2 318 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 WDR45Q9Y484 360 aa25.81■■□□□ 1.72
CCM2-201ENST00000258781 OR10H2O60403 315 aa25.8■■□□□ 1.72
CCM2-201ENST00000258781 CTNSO60931 367 aa25.8■■□□□ 1.72
CCM2-201ENST00000258781 MAP4K2Q12851 820 aa25.8■■□□□ 1.72
CCM2-201ENST00000258781 GRM7Q14831 915 aa25.8■■□□□ 1.72
CCM2-201ENST00000258781 ZC3H14Q6PJT7 736 aaKnown RBP25.8■■□□□ 1.72
CCM2-201ENST00000258781 VRK2Q86Y07 508 aa25.8■■□□□ 1.72
CCM2-201ENST00000258781 PLXDC1Q8IUK5 500 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms