RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 PHF10Q8WUB8 498 aaKnown RBP21.01■□□□□ 0.95
LSM4-201ENST00000252816 PPCDCQ96CD2 204 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 GNRHR2Q96P88 292 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 SLC6A15Q9H2J7 730 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 LDAHQ9H6V9 325 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 METTL7AQ9H8H3 244 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 QPCTLQ9NXS2 382 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 SH3BP4Q9P0V3 963 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 SPRR3Q9UBC9 169 aa21.01■□□□□ 0.95
LSM4-201ENST00000252816 OR6C70A6NIJ9 312 aa21■□□□□ 0.95
LSM4-201ENST00000252816 TMEM114B3SHH9 223 aa21■□□□□ 0.95
LSM4-201ENST00000252816 TSPAN2O60636 221 aa21■□□□□ 0.95
LSM4-201ENST00000252816 HCN1O60741 890 aa21■□□□□ 0.95
LSM4-201ENST00000252816 COQ9O75208 318 aa21■□□□□ 0.95
LSM4-201ENST00000252816 ERLIN1O75477 346 aa21■□□□□ 0.95
LSM4-201ENST00000252816 REM1O75628 298 aa21■□□□□ 0.95
LSM4-201ENST00000252816 MYZAPP0CAP1 466 aa21■□□□□ 0.95
LSM4-201ENST00000252816 BGNP21810 368 aa21■□□□□ 0.95
LSM4-201ENST00000252816 GDF1P27539 372 aa21■□□□□ 0.95
LSM4-201ENST00000252816 ASMTP46597 345 aa21■□□□□ 0.95
LSM4-201ENST00000252816 MASP1P48740 699 aa21■□□□□ 0.95
LSM4-201ENST00000252816 SMSP52788 366 aa21■□□□□ 0.95
LSM4-201ENST00000252816 PSG6Q00889 435 aa21■□□□□ 0.95
LSM4-201ENST00000252816 ZNF155Q12901 538 aaPredicted RBP21■□□□□ 0.95
LSM4-201ENST00000252816 HSPB3Q12988 150 aa21■□□□□ 0.95
LSM4-201ENST00000252816 C6orf136Q5SQH8 315 aa21■□□□□ 0.95
LSM4-201ENST00000252816 XKRXQ6PP77 449 aa21■□□□□ 0.95
LSM4-201ENST00000252816 SLC44A2Q8IWA5 706 aaPredicted RBP21■□□□□ 0.95
LSM4-201ENST00000252816 LIX1Q8N485 282 aa21■□□□□ 0.95
LSM4-201ENST00000252816 ZNF781Q8N8C0 355 aa21■□□□□ 0.95
LSM4-201ENST00000252816 SLC35A4Q96G79 324 aa21■□□□□ 0.95
LSM4-201ENST00000252816 TMEM41AQ96HV5 264 aa21■□□□□ 0.95
LSM4-201ENST00000252816 COL21A1Q96P44 957 aa21■□□□□ 0.95
LSM4-201ENST00000252816 ADOQ96SZ5 270 aa21■□□□□ 0.95
LSM4-201ENST00000252816 C1orf50Q9BV19 199 aa21■□□□□ 0.95
LSM4-201ENST00000252816 UBQLN3Q9H347 655 aa21■□□□□ 0.95
LSM4-201ENST00000252816 TP63Q9H3D4 680 aaPredicted RBP21■□□□□ 0.95
LSM4-201ENST00000252816 GALNT9Q9HCQ5 603 aa21■□□□□ 0.95
LSM4-201ENST00000252816 ACKR4Q9NPB9 350 aa21■□□□□ 0.95
LSM4-201ENST00000252816 DDX18Q9NVP1 670 aaKnown RBP21■□□□□ 0.95
LSM4-201ENST00000252816 B4GALT7Q9UBV7 327 aa21■□□□□ 0.95
LSM4-201ENST00000252816 C2orf72A6NCS6 295 aa20.99■□□□□ 0.95
LSM4-201ENST00000252816 PRSS44E7EML9 344 aa20.99■□□□□ 0.95
LSM4-201ENST00000252816 GNB5O14775 395 aa20.99■□□□□ 0.95
LSM4-201ENST00000252816 ICOSLGO75144 302 aa20.99■□□□□ 0.95
LSM4-201ENST00000252816 AGAP20933 346 aa20.99■□□□□ 0.95
LSM4-201ENST00000252816 GRNP28799 593 aaKnown RBP20.99■□□□□ 0.95
LSM4-201ENST00000252816 FRKP42685 505 aaPredicted RBP20.99■□□□□ 0.95
LSM4-201ENST00000252816 TRPC1P48995 793 aa20.99■□□□□ 0.95
LSM4-201ENST00000252816 ATP6AP1LQ52LC2 224 aa20.99■□□□□ 0.95
LSM4-201ENST00000252816 TIGD3Q6B0B8 471 aa20.99■□□□□ 0.95
LSM4-201ENST00000252816 WDR53Q7Z5U6 358 aaPredicted RBP20.99■□□□□ 0.95
LSM4-201ENST00000252816 EID3Q8N140 333 aa20.99■□□□□ 0.95
LSM4-201ENST00000252816 SORT1Q99523 831 aa20.99■□□□□ 0.95
LSM4-201ENST00000252816 OSBPL11Q9BXB4 747 aa20.99■□□□□ 0.95
LSM4-201ENST00000252816 EXO5Q9H790 373 aa20.99■□□□□ 0.95
LSM4-201ENST00000252816 C15orf41Q9Y2V0 281 aa20.99■□□□□ 0.95
LSM4-201ENST00000252816 PRAMEF25A6NGN4 478 aa20.98■□□□□ 0.95
LSM4-201ENST00000252816 BCKDKO14874 412 aa20.98■□□□□ 0.95
LSM4-201ENST00000252816 EFNA1P20827 205 aaPredicted RBP20.98■□□□□ 0.95
LSM4-201ENST00000252816 MAPK1P28482 360 aa20.98■□□□□ 0.95
LSM4-201ENST00000252816 SLC1A6P48664 564 aa20.98■□□□□ 0.95
LSM4-201ENST00000252816 CDK9P50750 372 aaKnown RBP20.98■□□□□ 0.95
LSM4-201ENST00000252816 PTGR1Q14914 329 aa20.98■□□□□ 0.95
LSM4-201ENST00000252816 SLC30A6Q6NXT4 461 aa20.98■□□□□ 0.95
LSM4-201ENST00000252816 ANGPTL8Q6UXH0 198 aa20.98■□□□□ 0.95
LSM4-201ENST00000252816 LARP4Q71RC2 724 aaKnown RBP eCLIP20.98■□□□□ 0.951e-6■■■□□ 15.8
LSM4-201ENST00000252816 ANKRD42Q8N9B4 389 aa20.98■□□□□ 0.95
LSM4-201ENST00000252816 FNDC5Q8NAU1 212 aa20.98■□□□□ 0.95
LSM4-201ENST00000252816 NEIL3Q8TAT5 605 aa20.98■□□□□ 0.95
LSM4-201ENST00000252816 NUDT8Q8WV74 236 aa20.98■□□□□ 0.95
LSM4-201ENST00000252816 TUBGCP3Q96CW5 907 aa20.98■□□□□ 0.95
LSM4-201ENST00000252816 KLRF1Q9NZS2 232 aa20.98■□□□□ 0.95
LSM4-201ENST00000252816 ATP6V1HQ9UI12 483 aa20.98■□□□□ 0.95
LSM4-201ENST00000252816 ACAD8Q9UKU7 415 aa20.98■□□□□ 0.95
LSM4-201ENST00000252816 KLF2Q9Y5W3 355 aaPredicted RBP20.98■□□□□ 0.95
LSM4-201ENST00000252816 SCAMP2O15127 329 aaKnown RBP20.97■□□□□ 0.95
LSM4-201ENST00000252816 ABCB7O75027 752 aa20.97■□□□□ 0.95
LSM4-201ENST00000252816 TRAPPC6AO75865 159 aa20.97■□□□□ 0.95
LSM4-201ENST00000252816 IFI6P09912 130 aa20.97■□□□□ 0.95
LSM4-201ENST00000252816 FREM3P0C091 2139 aa20.97■□□□□ 0.95
LSM4-201ENST00000252816 GRK2P25098 689 aa20.97■□□□□ 0.95
LSM4-201ENST00000252816 PTPN6P29350 595 aa20.97■□□□□ 0.95
LSM4-201ENST00000252816 WDR4P57081 412 aaKnown RBP20.97■□□□□ 0.95
LSM4-201ENST00000252816 SNTA1Q13424 505 aa20.97■□□□□ 0.95
LSM4-201ENST00000252816 PDCD2Q16342 344 aaPredicted RBP20.97■□□□□ 0.95
LSM4-201ENST00000252816 IL23RQ5VWK5 629 aa20.97■□□□□ 0.95
LSM4-201ENST00000252816 OR7A2PQ8NGA2 310 aa20.97■□□□□ 0.95
LSM4-201ENST00000252816 SARAFQ96BY9 339 aa20.97■□□□□ 0.95
LSM4-201ENST00000252816 EFHD2Q96C19 240 aaPredicted RBP20.97■□□□□ 0.95
LSM4-201ENST00000252816 MTERF3Q96E29 417 aa20.97■□□□□ 0.95
LSM4-201ENST00000252816 ZBED6CLQ96FA7 236 aaPredicted RBP20.97■□□□□ 0.95
LSM4-201ENST00000252816 PAIP2Q9BPZ3 127 aaKnown RBP20.97■□□□□ 0.95
LSM4-201ENST00000252816 ACSS1Q9NUB1 689 aaPredicted RBP20.97■□□□□ 0.95
LSM4-201ENST00000252816 RAP2CQ9Y3L5 183 aa20.97■□□□□ 0.95
LSM4-201ENST00000252816 OR10H1Q9Y4A9 318 aa20.97■□□□□ 0.95
LSM4-201ENST00000252816 TMEM120BA0PK00 339 aa20.96■□□□□ 0.95
LSM4-201ENST00000252816 SNPHO15079 494 aa20.96■□□□□ 0.95
LSM4-201ENST00000252816 HPNP05981 417 aa20.96■□□□□ 0.95
LSM4-201ENST00000252816 ACVR2AP27037 513 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms