RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 GIMAP2Q9UG22 337 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 TINAGQ9UJW2 476 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 EIF3LQ9Y262 564 aaKnown RBP11.72□□□□□ -0.53
VPREB3-201ENST00000248948 FREM3P0C091 2139 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 MYO7BQ6PIF6 2116 aa11.72□□□□□ -0.53
VPREB3-201ENST00000248948 CACNA1CQ13936 2221 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 A0A1B0GTH9 108 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 A0A1B0GVC2 190 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 CCL21O00585 134 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 AQP7O14520 342 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 AKAP10O43572 662 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 SUSD5O60279 629 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 HCN1O60741 890 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 UGT2B11O75310 529 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 SNNO75324 88 aaPredicted RBP11.71□□□□□ -0.53
VPREB3-201ENST00000248948 GP1BBP13224 206 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 PRPS1L1P21108 318 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 IL12BP29460 328 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 GPC1P35052 558 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 CASP3P42574 277 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 CORO7P57737 925 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 PSG6Q00889 435 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 EMX2Q04743 252 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 EFR3AQ14156 821 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 ZNHIT3Q15649 155 aaPredicted RBP11.71□□□□□ -0.53
VPREB3-201ENST00000248948 IL23RQ5VWK5 629 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 TMEM198Q66K66 360 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 ATG16L1Q676U5 607 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 SLC30A6Q6NXT4 461 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 CAMKMTQ7Z624 323 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 RNF138Q8WVD3 245 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 HOXB13Q92826 284 aaPredicted RBP11.71□□□□□ -0.53
VPREB3-201ENST00000248948 TMBIM1Q969X1 311 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 CIDECQ96AQ7 238 aaPredicted RBP11.71□□□□□ -0.53
VPREB3-201ENST00000248948 CCDC120Q96HB5 630 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 OSBPL11Q9BXB4 747 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 METTL7AQ9H8H3 244 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 ZNF395Q9H8N7 513 aaPredicted RBP11.71□□□□□ -0.53
VPREB3-201ENST00000248948 VIPAS39Q9H9C1 493 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 MEAF6Q9HAF1 191 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 NEUROD4Q9HD90 331 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 Q9N2J8 555 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 ACKR4Q9NPB9 350 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 THAP1Q9NVV9 213 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 SH3BP4Q9P0V3 963 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 NTMQ9P121 344 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 BAIAP2L1Q9UHR4 511 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 C15orf41Q9Y2V0 281 aa11.71□□□□□ -0.53
VPREB3-201ENST00000248948 PRAMEF25A6NGN4 478 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 E9PLN8 166 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 BCKDKO14874 412 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 KLF11O14901 512 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 SNPHO15079 494 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 TSPAN2O60636 221 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 ZG16O60844 167 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 H2AFXP16104 143 aaPredicted RBP11.7□□□□□ -0.54
VPREB3-201ENST00000248948 MASP1P48740 699 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 PNLIPRP2P54317 469 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 MANFP55145 182 aaKnown RBP11.7□□□□□ -0.54
VPREB3-201ENST00000248948 PRR5P85299 388 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 CYP27C1Q4G0S4 372 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 TRILQ7L0X0 811 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 MAMDC2Q7Z304 686 aaPredicted RBP11.7□□□□□ -0.54
VPREB3-201ENST00000248948 ZNF551Q7Z340 670 aaPredicted RBP11.7□□□□□ -0.54
VPREB3-201ENST00000248948 CD163Q86VB7 1156 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 PACS2Q86VP3 889 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 SLC44A2Q8IWA5 706 aaPredicted RBP11.7□□□□□ -0.54
VPREB3-201ENST00000248948 MGARPQ8TDB4 240 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 ZBTB9Q96C00 473 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 TMCO6Q96DC7 493 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 DTNBP1Q96EV8 351 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 ATP6V1G3Q96LB4 118 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 PRPF18Q99633 342 aaKnown RBP11.7□□□□□ -0.54
VPREB3-201ENST00000248948 VKORC1Q9BQB6 163 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 BHLHE41Q9C0J9 482 aaPredicted RBP11.7□□□□□ -0.54
VPREB3-201ENST00000248948 UBQLN3Q9H347 655 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 TP63Q9H3D4 680 aaPredicted RBP11.7□□□□□ -0.54
VPREB3-201ENST00000248948 KLRF1Q9NZS2 232 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 PLEKHB1Q9UF11 243 aaPredicted RBP11.7□□□□□ -0.54
VPREB3-201ENST00000248948 SH3BGRL2Q9UJC5 107 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 MEMO1Q9Y316 297 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 OR10H1Q9Y4A9 318 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 LIPGQ9Y5X9 500 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 UNC79Q9P2D8 2635 aa11.7□□□□□ -0.54
VPREB3-201ENST00000248948 PCNX1Q96RV3 2341 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 TRGV5A0A0B4J1U4 118 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 SLCO1B7G3V0H7 640 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 TPOP07202 933 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 G6PDP11413 515 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 ESRRAP11474 423 aaPredicted RBP11.69□□□□□ -0.54
VPREB3-201ENST00000248948 AGAP20933 346 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 GDF1P27539 372 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 PTGDSP41222 190 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 MAN2A2P49641 1150 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 CDK9P50750 372 aaKnown RBP11.69□□□□□ -0.54
VPREB3-201ENST00000248948 PSMD4P55036 377 aaKnown RBP11.69□□□□□ -0.54
VPREB3-201ENST00000248948 CLDN8P56748 225 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 OCRLQ01968 901 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 SLC10A1Q14973 349 aa11.69□□□□□ -0.54
VPREB3-201ENST00000248948 VPS26BQ4G0F5 336 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms