RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 TEX47Q8TBZ9 253 aa20.32■□□□□ 0.84
SH2D3A-201ENST00000245908 SLC25A46Q96AG3 418 aa20.32■□□□□ 0.84
SH2D3A-201ENST00000245908 SLC17A4Q9Y2C5 497 aa20.32■□□□□ 0.84
SH2D3A-201ENST00000245908 CARD8Q9Y2G2 431 aa20.32■□□□□ 0.84
SH2D3A-201ENST00000245908 SNRNP200O75643 2136 aaKnown RBP20.31■□□□□ 0.84
SH2D3A-201ENST00000245908 STK25O00506 426 aa20.31■□□□□ 0.84
SH2D3A-201ENST00000245908 CYP7B1O75881 506 aa20.31■□□□□ 0.84
SH2D3A-201ENST00000245908 UBXN7O94888 489 aa20.31■□□□□ 0.84
SH2D3A-201ENST00000245908 MYL12AP19105 171 aa20.31■□□□□ 0.84
SH2D3A-201ENST00000245908 HOXD11P31277 338 aaPredicted RBP20.31■□□□□ 0.84
SH2D3A-201ENST00000245908 IFNGR2P38484 337 aa20.31■□□□□ 0.84
SH2D3A-201ENST00000245908 TSFMP43897 325 aaKnown RBP20.31■□□□□ 0.84
SH2D3A-201ENST00000245908 ENPP2Q13822 863 aa20.31■□□□□ 0.84
SH2D3A-201ENST00000245908 CEBPEQ15744 281 aa20.31■□□□□ 0.84
SH2D3A-201ENST00000245908 GET4Q7L5D6 327 aaPredicted RBP20.31■□□□□ 0.84
SH2D3A-201ENST00000245908 GJD3Q8N144 294 aa20.31■□□□□ 0.84
SH2D3A-201ENST00000245908 SRFBP1Q8NEF9 429 aaKnown RBP20.31■□□□□ 0.84
SH2D3A-201ENST00000245908 HERVK_113Q902F9 699 aa20.31■□□□□ 0.84
SH2D3A-201ENST00000245908 CHFRQ96EP1 664 aa20.31■□□□□ 0.84
SH2D3A-201ENST00000245908 SAP130Q9H0E3 1048 aa20.31■□□□□ 0.84
SH2D3A-201ENST00000245908 ISYNA1Q9NPH2 558 aa20.31■□□□□ 0.84
SH2D3A-201ENST00000245908 CMAHPQ9Y471 501 aa20.31■□□□□ 0.84
SH2D3A-201ENST00000245908 TMEM129A0AVI4 362 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 FAM170BA6NMN3 283 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 PLD2O14939 933 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 KCNJ13O60928 360 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 CDRT1O95170 752 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 ALPPP05187 535 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 TSPAN31Q12999 210 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 TRAM2Q15035 370 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 ZNF79Q15937 498 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 DUSP6Q16828 381 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 UAP1L1Q3KQV9 507 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 AGAP6Q5VW22 663 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 CLDN22Q8N7P3 220 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 ASCC1Q8N9N2 400 aaKnown RBP20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 NUP43Q8NFH3 380 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 OR8D4Q8NGM9 314 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 DIO2Q92813 273 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 RNFT2Q96EX2 444 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 AGAP4Q96P64 663 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 SYNPO2LQ9H987 977 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 GDE1Q9NZC3 331 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 APOBEC3BQ9UH17 382 aaKnown RBP20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 MUTYHQ9UIF7 546 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 ZNF221Q9UK13 617 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 SPIN1Q9Y657 262 aaPredicted RBP20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 SNTNA6NMZ2 147 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 NR2F6P10588 404 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 MPIP34949 423 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 MINDY4Q4G0A6 757 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 RASSF6Q6ZTQ3 369 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 PRICKLE2Q7Z3G6 844 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 MEX3DQ86XN8 651 aaKnown RBP20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 MFSD9Q8NBP5 474 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 ELP4Q96EB1 424 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 ZNF681Q96N22 645 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 TRMT61BQ9BVS5 477 aaKnown RBP20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 GIMAP4Q9NUV9 329 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 SPHK1Q9NYA1 384 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 CALML5Q9NZT1 146 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 LIPT1Q9Y234 373 aa20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 MDC1Q14676 2089 aaKnown RBP20.3■□□□□ 0.84
SH2D3A-201ENST00000245908 PROM1O43490 865 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 MYOGP15173 224 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 MC3RP41968 323 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 TGM4P49221 684 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 LAPTM4BQ86VI4 370 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 VRK2Q86Y07 508 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 FAM181AQ8N9Y4 354 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 TMEM145Q8NBT3 493 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 MSLNLQ96KJ4 702 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 PRR14Q9BWN1 585 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 C1QTNF2Q9BXJ5 285 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 SRRQ9GZT4 340 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 ANKRD19PQ9H560 264 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 SEMA4GQ9NTN9 838 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 SLC13A4Q9UKG4 626 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 GPR55Q9Y2T6 319 aaPredicted RBP20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 PCDHGB2Q9Y5G2 931 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 N6AMT1Q9Y5N5 214 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 KDM4EB2RXH2 506 aaPredicted RBP20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 ALX3O95076 343 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 TSPAN19P0C672 248 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 MSL3P1P0C860 447 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 CMPK1P30085 196 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 RAB8AP61006 207 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 TPBGQ13641 420 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 LRRC32Q14392 662 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 RPE65Q16518 533 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 PLK5Q496M5 336 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 ZMAT1Q5H9K5 638 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 ZNF425Q6IV72 752 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 OR9A2Q8NGT5 310 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 TM9SF4Q92544 642 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 SLC38A2Q96QD8 506 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 SFXN1Q9H9B4 322 aa20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 EXOSC1Q9Y3B2 195 aaKnown RBP20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 SF3B6Q9Y3B4 125 aaKnown RBP20.29■□□□□ 0.84
SH2D3A-201ENST00000245908 CHST2Q9Y4C5 530 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms