RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 PHEXP78562 749 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 DOC2AQ14183 400 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 E2F2Q14209 437 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 C18orf63Q68DL7 685 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 RNF111Q6ZNA4 994 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 YRDCQ86U90 279 aaKnown RBP12.59□□□□□ -0.39
DDX39A-201ENST00000242776 PRR22Q8IZ63 422 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 GCNT2Q8N0V5 402 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 RNF175Q8N4F7 328 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 L3MBTL4Q8NA19 623 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 SPATA3Q8NHX4 192 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 RBM18Q96H35 190 aaKnown RBP12.59□□□□□ -0.39
DDX39A-201ENST00000242776 WDYHV1Q96HA8 205 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 RILPQ96NA2 401 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 DACH2Q96NX9 599 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 KCNC2Q96PR1 638 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 WWTR1Q9GZV5 400 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 PRDM14Q9GZV8 571 aa12.59□□□□□ -0.39
DDX39A-201ENST00000242776 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.59□□□□□ -0.39
DDX39A-201ENST00000242776 ZANQ9Y493 2812 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 WASHC1A8K0Z3 465 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 SNPHO15079 494 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 TRIM3O75382 744 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-201ENST00000242776 LYPLA1O75608 230 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-201ENST00000242776 OR4F21O95013 312 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 CHEK2O96017 543 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 IGKV3-11P04433 115 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 NID1P14543 1247 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 CD22P20273 847 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 GSTM2P28161 218 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 SERPINB1P30740 379 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 CDK9P50750 372 aaKnown RBP12.58□□□□□ -0.4
DDX39A-201ENST00000242776 SH2D4BQ5SQS7 431 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 C10orf62Q5T681 223 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-201ENST00000242776 TTC19Q6DKK2 380 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-201ENST00000242776 VASNQ6EMK4 673 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 LETMD1Q6P1Q0 360 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 MED27Q6P2C8 311 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 SLC15A4Q8N697 577 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 SIMC1Q8NDZ2 872 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 ABTB1Q969K4 478 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-201ENST00000242776 INTS12Q96CB8 462 aaKnown RBP12.58□□□□□ -0.4
DDX39A-201ENST00000242776 C7orf26Q96N11 449 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 CDK15Q96Q40 435 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 CCL19Q99731 98 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 BDH2Q9BUT1 245 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 SHCBP1LQ9BZQ2 653 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 NT5DC2Q9H857 520 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 TEX10Q9NXF1 929 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-201ENST00000242776 JKAMPQ9P055 326 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 SNX6Q9UNH7 406 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 RNF11Q9Y3C5 154 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 PCDHGA11Q9Y5H2 935 aa12.58□□□□□ -0.4
DDX39A-201ENST00000242776 CHD3Q12873 2000 aaKnown RBP12.57□□□□□ -0.4
DDX39A-201ENST00000242776 C2orf72A6NCS6 295 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 MBD3L4A6NDZ8 208 aaPredicted RBP12.57□□□□□ -0.4
DDX39A-201ENST00000242776 MBD3L3A6NE82 208 aaPredicted RBP12.57□□□□□ -0.4
DDX39A-201ENST00000242776 MBD3L5A6NJ08 208 aaPredicted RBP12.57□□□□□ -0.4
DDX39A-201ENST00000242776 CD8B2A6NJW9 211 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 GLOD5A6NK44 160 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 UBFD1O14562 309 aaKnown RBP12.57□□□□□ -0.4
DDX39A-201ENST00000242776 AZIN1O14977 448 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 ITM2AO43736 263 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 OR10H2O60403 315 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 KRT6AP02538 564 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 KRT6BP04259 564 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 UROSP10746 265 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 KRT6CP48668 564 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 PLIN5Q00G26 463 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 OCRLQ01968 901 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 TBL3Q12788 808 aaKnown RBP12.57□□□□□ -0.4
DDX39A-201ENST00000242776 IFT88Q13099 833 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 SLAMF1Q13291 335 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 DDX39BQ13838 428 aaKnown RBP12.57□□□□□ -0.4
DDX39A-201ENST00000242776 RCAN2Q14206 197 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 NTRK2Q16620 822 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 CPSF6Q16630 551 aaKnown RBP eCLIP12.57□□□□□ -0.4
DDX39A-201ENST00000242776 AP5B1Q2VPB7 878 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 CDYL2Q8N8U2 506 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 MBD3L2Q8NHZ7 208 aaPredicted RBP12.57□□□□□ -0.4
DDX39A-201ENST00000242776 PIK3IP1Q96FE7 263 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 FBXL20Q96IG2 436 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 ART5Q96L15 291 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 SORT1Q99523 831 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 TUBA1CQ9BQE3 449 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 ELOVL6Q9H5J4 265 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 RPF2Q9H7B2 306 aaKnown RBP12.57□□□□□ -0.4
DDX39A-201ENST00000242776 ADGRE2Q9UHX3 823 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 C15orf41Q9Y2V0 281 aa12.57□□□□□ -0.4
DDX39A-201ENST00000242776 H0YIV9 168 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 PPP6CO00743 305 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 HPNP05981 417 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 FGF4P08620 206 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 CYP4B1P13584 511 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 ALOX15P16050 662 aaPredicted RBP12.56□□□□□ -0.4
DDX39A-201ENST00000242776 HIST1H1TP22492 207 aaPredicted RBP12.56□□□□□ -0.4
DDX39A-201ENST00000242776 TCEA1P23193 301 aaKnown RBP12.56□□□□□ -0.4
DDX39A-201ENST00000242776 SSTR4P31391 388 aa12.56□□□□□ -0.4
DDX39A-201ENST00000242776 RPL14P50914 215 aaKnown RBP12.56□□□□□ -0.4
DDX39A-201ENST00000242776 EBPQ15125 230 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms