RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 FAM83CQ9BQN1 747 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 POTEKPQ9BYX7 375 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 MYH7BA7E2Y1 1941 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 FRS3O43559 492 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 IL1RNP18510 177 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 MAGEA3P43357 314 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 GALNT1Q10472 559 aaPredicted RBP12.7□□□□□ -0.38
NEK4-201ENST00000233027 LRIF1Q5T3J3 769 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 RBM12BQ8IXT5 1001 aaKnown RBP12.7□□□□□ -0.38
NEK4-201ENST00000233027 VWA5B2Q8N398 1253 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 B3GNT7Q8NFL0 401 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 MR1Q95460 341 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 NEDD4LQ96PU5 975 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 CSNK1G3Q9Y6M4 447 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 NAV1Q8NEY1 1877 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 SLC2A5P22732 501 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 PROX2Q3B8N5 592 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 MANEALQ5VSG8 457 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 OR52E8Q6IFG1 317 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 TLDC1Q6P9B6 456 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 SERINC5Q86VE9 423 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 COMTD1Q86VU5 262 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 MFSD6LQ8IWD5 586 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 ZSCAN4Q8NAM6 433 aaPredicted RBP12.7□□□□□ -0.38
NEK4-201ENST00000233027 OR5AK2Q8NH90 309 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 FAM46BQ96A09 425 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 SLC12A9Q9BXP2 914 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 MVB12BQ9H7P6 319 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 HIF3AQ9Y2N7 669 aa12.7□□□□□ -0.38
NEK4-201ENST00000233027 HEMK1Q9Y5R4 338 aaPredicted RBP12.7□□□□□ -0.38
NEK4-201ENST00000233027 TVP23AA6NH52 213 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 C3orf33Q6P1S2 294 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 SLC35F2Q8IXU6 374 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 ADGRG5Q8IZF4 528 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 CYB561A3Q8NBI2 242 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 TEPSINQ96N21 525 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 ALG8Q9BVK2 526 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 PHLPP1O60346 1717 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 KEAP1Q14145 624 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 DEFB110Q30KQ9 67 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 ZC3H14Q6PJT7 736 aaKnown RBP12.69□□□□□ -0.38
NEK4-201ENST00000233027 AVL9Q8NBF6 648 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 OR5AR1Q8NGP9 310 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 SPRYD4Q8WW59 207 aaPredicted RBP12.69□□□□□ -0.38
NEK4-201ENST00000233027 HYLS1Q96M11 299 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 RAD9AQ99638 391 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 AGPAT4Q9NRZ5 378 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 MEIS3P1A6NDR6 274 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 NPIPB15A6NHN6 443 aaPredicted RBP12.69□□□□□ -0.38
NEK4-201ENST00000233027 UBFD1O14562 309 aaKnown RBP12.69□□□□□ -0.38
NEK4-201ENST00000233027 SPDEFO95238 335 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 ARSAP15289 507 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 CERS1P27544 350 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 PTPN6P29350 595 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 POU3F4P49335 361 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 CTBP2P56545 445 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 NKPD1Q17RQ9 610 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 AWAT2Q6E213 333 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 ZSCAN1Q8NBB4 408 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 OR9A2Q8NGT5 310 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 OR5W2Q8NH69 310 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 NECAB3Q96P71 396 aaPredicted RBP12.69□□□□□ -0.38
NEK4-201ENST00000233027 KATNBL1Q9H079 304 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 PCDHB16Q9NRJ7 776 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 AK6Q9Y3D8 172 aaKnown RBP12.69□□□□□ -0.38
NEK4-201ENST00000233027 ATE1O95260 518 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 ZNF84P51523 738 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 PRKXP51817 358 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 ELOCQ15369 112 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 PCGF3Q3KNV8 242 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 TMEM164Q5U3C3 297 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 ELP2Q6IA86 826 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 GSG1LQ6UXU4 331 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 TMEM25Q86YD3 366 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 PDZD9Q8IXQ8 264 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 METTL25Q8N6Q8 603 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 PITX2Q99697 317 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 KLHL9Q9P2J3 617 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 GPR34Q9UPC5 381 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 SLC7A11Q9UPY5 501 aa12.69□□□□□ -0.38
NEK4-201ENST00000233027 CHD2O14647 1828 aaKnown RBP12.69□□□□□ -0.38
NEK4-201ENST00000233027 NPIPA5A0A0B4J1W7 369 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 NPIPA7E9PJI5 369 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 GPR37L1O60883 481 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 ERCC1P07992 297 aaPredicted RBP12.68□□□□□ -0.38
NEK4-201ENST00000233027 NPIPA8P0DM63 369 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 DHCR24Q15392 516 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 FAM69BQ5VUD6 431 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 B3GNT8Q7Z7M8 397 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 NLGN4XQ8N0W4 816 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 RNF175Q8N4F7 328 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 ACVR1CQ8NER5 493 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 OR5T1Q8NG75 326 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 TFAP2CQ92754 450 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 ZNF486Q96H40 463 aaPredicted RBP12.68□□□□□ -0.38
NEK4-201ENST00000233027 URM1Q9BTM9 101 aaKnown RBP12.68□□□□□ -0.38
NEK4-201ENST00000233027 DHRS4Q9BTZ2 278 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.68□□□□□ -0.38
NEK4-201ENST00000233027 SLC2A4RGQ9NR83 387 aa12.68□□□□□ -0.38
NEK4-201ENST00000233027 COPZ2Q9P299 210 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms