RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 TTTY12Q9BZ98 90 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 CXorf36Q9H7Y0 433 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 SACM1LQ9NTJ5 587 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 ACSS1Q9NUB1 689 aaPredicted RBP12.59□□□□□ -0.39
VEGFA-201ENST00000230480 SH3BP4Q9P0V3 963 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 ENTPD4Q9Y227 616 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 OSGIN2Q9Y236 505 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 GPR45Q9Y5Y3 372 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 KIAA1549Q9HCM3 1950 aa12.59□□□□□ -0.39
VEGFA-201ENST00000230480 CACNA1CQ13936 2221 aa12.58□□□□□ -0.39
VEGFA-201ENST00000230480 GXYLT2A0PJZ3 443 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 KLRC4-KLRK1H3BQV0 150 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 HDAC3O15379 428 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 PDPK1O15530 556 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 ERN1O75460 977 aaKnown RBP12.58□□□□□ -0.4
VEGFA-201ENST00000230480 PPM1BO75688 479 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 SNUPNO95149 360 aaKnown RBP12.58□□□□□ -0.4
VEGFA-201ENST00000230480 LDLRP01130 860 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 ENDOUP21128 410 aaKnown RBP12.58□□□□□ -0.4
VEGFA-201ENST00000230480 ASMTP46597 345 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 HSPB3Q12988 150 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 TMEM198Q66K66 360 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 TMEM81Q6P7N7 255 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 ZAR1Q86SH2 424 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 HOMEZQ8IX15 550 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 PHF3Q92576 2039 aaKnown RBP12.58□□□□□ -0.4
VEGFA-201ENST00000230480 TMBIM1Q969X1 311 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 RELTQ969Z4 430 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 HSPBAP1Q96EW2 488 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 SLC35A4Q96G79 324 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 FAM173AQ9BQD7 235 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 DEFB127Q9H1M4 99 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 UBQLN3Q9H347 655 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 SERHL2Q9H4I8 314 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 PFDN4Q9NQP4 134 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 FBXO34Q9NWN3 711 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 NKIRAS1Q9NYS0 192 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 SEC14L3Q9UDX4 400 aa12.58□□□□□ -0.4
VEGFA-201ENST00000230480 HEATR5AQ86XA9 2040 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 CENPEQ02224 2701 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 GOLGA8QA0A0J9YX86 632 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 GOLGA8OA6NCC3 632 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 C2orf72A6NCS6 295 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 FAM166BA8MTA8 275 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 C9JVG2 144 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 GOLGA8NF8WBI6 632 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 IGHG3P01860 377 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 KITP10721 976 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 ACP2P11117 423 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 ZNF24P17028 368 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 LBPP18428 481 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 MAGEA5P43359 124 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 MAN2A2P49641 1150 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 UFM1P61960 85 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 DCAF7P61962 342 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 PPIAP62937 165 aaKnown RBP12.57□□□□□ -0.4
VEGFA-201ENST00000230480 RPS6KA2Q15349 733 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 C3AR1Q16581 482 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 EPGNQ6UW88 154 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 GFRALQ6UXV0 394 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 APOOLQ6UXV4 268 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 NCCRP1Q6ZVX7 275 aaPredicted RBP12.57□□□□□ -0.4
VEGFA-201ENST00000230480 LRRC34Q8IZ02 419 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 CLECL1Q8IZS7 167 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 TAGAPQ8N103 731 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 SLC34A3Q8N130 599 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 FAM26EQ8N5C1 309 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 WDSUB1Q8N9V3 476 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 POGLUT1Q8NBL1 392 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 FAM110BQ8TC76 370 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 FAM120BQ96EK7 910 aaKnown RBP12.57□□□□□ -0.4
VEGFA-201ENST00000230480 MAGED4Q96JG8 741 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 IL1RL2Q9HB29 575 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 GIMAP4Q9NUV9 329 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 AIG1Q9NVV5 245 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 GPATCH2Q9NW75 528 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 PRODH2Q9UF12 536 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 KCNE3Q9Y6H6 103 aa12.57□□□□□ -0.4
VEGFA-201ENST00000230480 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.57□□□□□ -0.4
VEGFA-201ENST00000230480 A0A1B0GTH9 108 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 A0A1B0GVC2 190 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 HMGB1P1B2RPK0 211 aaPredicted RBP12.56□□□□□ -0.4
VEGFA-201ENST00000230480 ACOX3O15254 700 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 FADS1O60427 444 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 BCAS2O75934 225 aaPredicted RBP12.56□□□□□ -0.4
VEGFA-201ENST00000230480 PDE9AO76083 593 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 SLITRK5O94991 958 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 NKX2-2O95096 273 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 C6orf47O95873 294 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 PRPS1L1P21108 318 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 PPP2R2AP63151 447 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 HBA1P69905 142 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 CDSNQ15517 529 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 KRTCAP3Q53RY4 240 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 C1QL3Q5VWW1 255 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 HLA-DQA1Q5Y7H0 255 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 OR4F3Q6IEY1 312 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 FAM47EQ6ZV65 393 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 NUP54Q7Z3B4 507 aa12.56□□□□□ -0.4
VEGFA-201ENST00000230480 YTHDF3Q7Z739 585 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms