RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 LCN9Q8WX39 176 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 KLF15Q9UIH9 416 aa20.62■□□□□ 0.89
SMARCD2-201ENST00000225742 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 PRSS38A1L453 326 aa20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 K7EQS6 105 aa20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 SNPHO15079 494 aa20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 CCNYL3P0C7X3 344 aa20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 TMED10P49755 219 aaKnown RBP20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 ADPRHP54922 357 aa20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 FAM214AQ32MH5 1076 aa20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 SDE2Q6IQ49 451 aa20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 ZNF730Q6ZMV8 503 aa20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 RRM2BQ7LG56 351 aa20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 BCDIN3DQ7Z5W3 292 aaKnown RBP20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 CLDN22Q8N7P3 220 aa20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 OSTF1Q92882 214 aa20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 TMCO6Q96DC7 493 aa20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 GIMAP5Q96F15 307 aa20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 GABRG3Q99928 467 aa20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 KXD1Q9BQD3 176 aa20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 MED18Q9BUE0 208 aa20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 KLHL25Q9H0H3 589 aa20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 CACYBPQ9HB71 228 aaKnown RBP20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 ITGB1BP2Q9UKP3 347 aa20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 SCML1Q9UN30 329 aa20.61■□□□□ 0.89
SMARCD2-201ENST00000225742 OR5F1O95221 314 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 NTSR1P30989 418 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 ETV5P41161 510 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 ETV1P50549 477 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 TPBGQ13641 420 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 CDC73Q6P1J9 531 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 PRICKLE2Q7Z3G6 844 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 LAPTM4BQ86VI4 370 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 ADAMTS15Q8TE58 950 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 ACOT11Q8WXI4 607 aaPredicted RBP20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 RNFT2Q96EX2 444 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 C10orf90Q96M02 699 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 MS4A4EQ96PG1 132 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 SDHCQ99643 169 aaPredicted RBP20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 TRMT61BQ9BVS5 477 aaKnown RBP20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 FGF22Q9HCT0 170 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 INIPQ9NRY2 104 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 MED17Q9NVC6 651 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 TBC1D3DA0A087WVF3 549 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 TBC1D3IA0A087WXS9 549 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 TBC1D3EA0A087X179 549 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 TBC1D3KA0A087X1G2 549 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 TBC1D3FA6NER0 549 aaPredicted RBP20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 GRXCR1A8MXD5 290 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 TBC1D3LB9A6J9 549 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 AP3D1O14617 1153 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 KCNK2O95069 426 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 EIF2S1P05198 315 aaKnown RBP20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 TBC1D3HP0C7X1 549 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 FPR3P25089 353 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 OMPP47874 163 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 CD300CQ08708 224 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 TBC1D3GQ6DHY5 549 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 TBC1D3CQ6IPX1 549 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 VN1R4Q7Z5H5 301 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 TRIM73Q86UV7 250 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 VRK2Q86Y07 508 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 C7orf61Q8IZ16 206 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 TBC1D3Q8IZP1 549 aaPredicted RBP20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 LRRC25Q8N386 305 aaPredicted RBP20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 OR52P1PQ8NH57 321 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 RFKQ969G6 155 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 BARHL1Q9BZE3 327 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 PLA2G12AQ9BZM1 189 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 MTHFD2LQ9H903 347 aaPredicted RBP20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 SEMA4GQ9NTN9 838 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 PCOLCE2Q9UKZ9 415 aa20.6■□□□□ 0.89
SMARCD2-201ENST00000225742 TSPAN19P0C672 248 aa20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 PTGER1P34995 402 aa20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 SEC13P55735 322 aa20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 TNFRSF17Q02223 184 aa20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 KIR2DS3Q14952 304 aa20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 PLK5Q496M5 336 aa20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 ATAT1Q5SQI0 421 aa20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 LIPKQ5VXJ0 399 aa20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 MFSD12Q6NUT3 480 aa20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 PAQR6Q6TCH4 344 aa20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 TMPRSS11AQ6ZMR5 421 aa20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 GDPD3Q7L5L3 318 aa20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 ANKK1Q8NFD2 765 aa20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 OR4E2Q8NGC2 313 aa20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 SLC25A46Q96AG3 418 aa20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 EFHD2Q96C19 240 aaPredicted RBP20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 SLC35A4Q96G79 324 aa20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 SERINC2Q96SA4 455 aa20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 NELL2Q99435 816 aa20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 MKRN2Q9H000 416 aaKnown RBP20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 EGLN3Q9H6Z9 239 aa20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 SNTG1Q9NSN8 517 aa20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 TXNL4BQ9NX01 149 aaKnown RBP20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 ZNF232Q9UNY5 417 aa20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 MDC1Q14676 2089 aaKnown RBP20.59■□□□□ 0.89
SMARCD2-201ENST00000225742 MTNR1AP48039 350 aa20.58■□□□□ 0.89
SMARCD2-201ENST00000225742 PSPHP78330 225 aa20.58■□□□□ 0.89
SMARCD2-201ENST00000225742 SUZ12Q15022 739 aaKnown RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms