RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 PRMT8Q9NR22 394 aaPredicted RBP13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 SCN3BQ9NY72 215 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 CHST2Q9Y4C5 530 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 KNL1Q8NG31 2342 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 MN1Q10571 1320 aaPredicted RBP13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 AGAP5A6NIR3 686 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 H3BMH7 237 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 HRO43593 1189 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 PCDHGA12O60330 932 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 WBP4O75554 376 aaKnown RBP13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 RPS4Y1P22090 263 aaKnown RBP13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 AVPR1BP47901 424 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 ARRB1P49407 418 aaPredicted RBP13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 DUSP8Q13202 625 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 PMS2P3Q13401 168 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 PIN1Q13526 163 aaPredicted RBP13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 RAB39AQ14964 217 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 SEC23BQ15437 767 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 FGD3Q5JSP0 725 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 LYSMD4Q5XG99 296 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 KLHL17Q6TDP4 642 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 PLXDC1Q8IUK5 500 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 SLC35F3Q8IY50 421 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 PEX5LQ8IYB4 626 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 ENTHD1Q8IYW4 607 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 BPIFB6Q8NFQ5 453 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 OR52P1PQ8NH57 321 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 RHOXF1Q8NHV9 184 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 ZNF420Q8TAQ5 688 aaPredicted RBP13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 SLC7A13Q8TCU3 470 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 IPCEF1Q8WWN9 437 aaPredicted RBP13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 SLC9A6Q92581 669 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 ZG16BQ96DA0 208 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 NODALQ96S42 347 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 UCK2Q9BZX2 261 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 CXorf21Q9HAI6 301 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 ADAP2Q9NPF8 381 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 MAN2C1Q9NTJ4 1040 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 PLCXD1Q9NUJ7 323 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 PAK1IP1Q9NWT1 392 aaPredicted RBP13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 SOHLH2Q9NX45 425 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 KLHL28Q9NXS3 571 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 FTSJ1Q9UET6 329 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 MUTYHQ9UIF7 546 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 SLC13A4Q9UKG4 626 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 WDR45Q9Y484 360 aa13.36□□□□□ -0.27
RTFDC1-201ENST00000023939 GON4LQ3T8J9 2241 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 SPAG17Q6Q759 2223 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 ZAR1LA6NP61 321 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 CLDN4O14493 209 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 ZNF749O43361 778 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 DUX1O43812 170 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 AHCYL1O43865 530 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 SEC14L2O76054 403 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 NKX2-2O95096 273 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 CBX7O95931 251 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 CT62P0C5K7 136 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 MSL3P1P0C860 447 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 OSMP13725 252 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 GNSP15586 552 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 ITIH1P19827 911 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 S1PR1P21453 382 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 ALDH4A1P30038 563 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 GALNSP34059 522 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 CRISP1P54107 249 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 HSD17B7P56937 341 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 BNC1Q01954 994 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 BIKQ13323 160 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 ILKQ13418 452 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 PMS2CLQ68D20 193 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 CWF19L1Q69YN2 538 aaKnown RBP13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 GTF2IRD2BQ6EKJ0 949 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 LAIR1Q6GTX8 287 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 PGBD2Q6P3X8 592 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 WDR53Q7Z5U6 358 aaPredicted RBP13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 GTF2IRD2Q86UP8 949 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 VRK2Q86Y07 508 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 KMT5CQ86Y97 462 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 VWA5B2Q8N398 1253 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 OR13F1Q8NGS4 319 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 APH1BQ8WW43 257 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 AHCYL2Q96HN2 611 aaKnown RBP13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 ZNF578Q96N58 590 aaPredicted RBP13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 DOK1Q99704 481 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 QRSL1Q9H0R6 528 aaKnown RBP13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 CACYBPQ9HB71 228 aaKnown RBP13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 HCN3Q9P1Z3 774 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 REV1Q9UBZ9 1251 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 ZNF232Q9UNY5 417 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 RNF6Q9Y252 685 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 ZNF443Q9Y2A4 671 aaPredicted RBP13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 CLDN16Q9Y5I7 305 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 SNX5Q9Y5X3 404 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 CCDC88CQ9P219 2028 aa13.35□□□□□ -0.27
RTFDC1-201ENST00000023939 CCDC160A6NGH7 325 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 XPNPEP2O43895 674 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 OR10H2O60403 315 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 NME6O75414 186 aaPredicted RBP13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 STX11O75558 287 aa13.34□□□□□ -0.27
RTFDC1-201ENST00000023939 ATXN8OSP0DMR3 200 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms