RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Gm33543A0A1B0GSI5 81 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 CtcflA2APF3 636 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Olfr1032A2ATE5 310 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gm21904A8HG57 180 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gm13271B1AYH9 182 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Otud4B2RRE7 1107 aaKnown RBP9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Znf382B2RXC5 579 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gm609E9Q573 300 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gm597E9Q8J5 896 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Zfp809G3X9G7 402 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gm21866J3QMH4 180 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gm17026K7N6Z0 213 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 C1dO35473 141 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Ntf3P20181 258 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Wdr5P61965 334 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Smad5P97454 465 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Zc3hav1Q3UPF5 946 aaKnown RBP9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Slc27a5Q4LDG0 689 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Irf4Q64287 450 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Katnb1Q8BG40 658 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Ccm2Q8K2Y9 453 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Agpat4Q8K4X7 378 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Frs3Q91WJ0 492 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Ppp1r16aQ923M0 524 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Naalad2Q9CZR2 740 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 PalmdQ9JHU2 551 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Slc22a28B2RT89 552 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 CrnnD3YUU6 520 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gm21319F6YNI8 144 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 KeraO35367 351 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 CyctP00015 105 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 C1qaP98086 245 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Hif3aQ0VBL6 662 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cdk10Q3UMM4 360 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Sgk494Q5SYL1 278 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Ugt8Q64676 541 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Supv3l1Q80YD1 779 aaKnown RBP9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cnksr3Q8BMA3 555 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Zcchc3Q8BPK2 400 aaKnown RBP9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Yipf4Q8C407 246 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Kcnmb1Q8CAE3 191 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cox10Q8CFY5 443 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Vmn1r192Q8K4C9 300 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Noxo1Q8VCM2 349 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Olfr551Q8VG23 315 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Asb16Q8VHS5 453 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Pskh1Q91YA2 424 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Slc22a30Q96LX3 552 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Tmed9Q99KF1 235 aaKnown RBP9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Yaf2Q99LW6 179 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Wdr6Q99ME2 1125 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Prkar1aQ9DBC7 381 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Sars2Q9JJL8 518 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Ppm1dQ9QZ67 598 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 ChmlQ9QZD5 621 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Ddi2A2ADY9 399 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 2610021A01RikE9Q0Q3 834 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 DdostO54734 441 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 RngttO55236 597 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Ulk1O70405 1051 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 CaskO70589 926 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 H2-K1P01901 369 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Mtnd2P03893 345 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cdk1P11440 297 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Usp30Q3UN04 517 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Mup20Q5FW60 181 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Runx3Q64131 409 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 AY358078Q6UY53 465 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Tmc6Q7TN60 810 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Phf24Q80TL4 400 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gm10330Q8BKS1 112 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Bnc2Q8BMQ3 1127 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Spon2Q8BMS2 330 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Npsr1Q8BZP8 371 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Tmem200aQ8C817 491 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Gatad2aQ8CHY6 629 aaKnown RBP9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Coq9Q8K1Z0 313 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Olfr633Q8VF02 312 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Sh3bp4Q921I6 962 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Camk2gQ923T9 529 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Exo5Q9CXP9 373 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Adam26aQ9R158 697 aa9.26□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Tgm7A2ART8 616 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Adam3F8VQ03 822 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 NnmtO55239 264 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 OsmrO70458 971 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 MbpP04370 250 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Pou3f2P31360 445 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Igfbp3P47878 292 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Snrpd2P62317 118 aaKnown RBP9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Taar2Q5QD17 339 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 CfiQ61129 603 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Nt5eQ61503 576 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Lasp1Q61792 263 aaKnown RBP9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Olfr128Q7TRJ1 308 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Ap4e1Q80V94 1122 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Chrnb3Q8BMN3 464 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Serpina11Q8CIE0 424 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Fahd1Q8R0F8 227 aa9.25□□□□□ -0.93
Ccdc40-202ENSMUST00000053440 Cwh43Q91YL7 699 aa9.25□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms