RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Slc38a3Q9DCP2 505 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Taf8Q9EQH4 308 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Mageh1Q9NWG9 218 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cldn8Q9Z260 225 aa9.8□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr560A0A1B0GSU5 314 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm8220F6YKI2 213 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Zfp619G3X9T2 1161 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Nthl1O35980 300 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Rps26P62855 115 aaKnown RBP9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 JupQ02257 745 aaKnown RBP9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cd244Q07763 397 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Pde12Q3TIU4 608 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Prss53Q571E5 552 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Taar8aQ5QD07 344 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Foxd3Q61060 465 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gstm7Q80W21 218 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gpr176Q80WT4 515 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Scgb3a1Q920D7 104 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Timm22Q9CQ85 194 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gtf2e2Q9D902 292 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Entpd4Q9DBT4 613 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Tyk2Q9R117 1184 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Rad9aQ9Z0F6 389 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 IghdA0A0A6YW14 291 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm10800D3Z496 220 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr723E9PZU2 309 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr724K7N5X7 309 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Dnmt3cP0DOY1 709 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Apobec1P51908 229 aaKnown RBP9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Eif5aP63242 154 aaKnown RBP9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cry1P97784 606 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 TifaQ793I8 184 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Adamtsl2Q7TSK7 957 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Mal2Q8BI08 175 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Unc119bQ8C4B4 251 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Rdh1Q8CGV4 317 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Akr1c18Q8K023 323 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 FgbQ8K0E8 481 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Memo1Q91VH6 297 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Wdr45bQ9CR39 344 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Fam13cQ9DBR2 601 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Avpr1bQ9WU02 421 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm9008E9PVG0 424 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Kbtbd6E9PYD7 486 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ap1arE9PYF7 298 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Pate1E9Q658 125 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Arhgap40E9Q6X9 672 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Kbtbd7G5E8C2 690 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Capn1O35350 713 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Galr2O88854 371 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 ItgamP05555 1153 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ido1P28776 407 aaKnown RBP9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 TpoP35419 914 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Rab8bP61028 207 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 MitfQ08874 526 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Zfp791Q497V9 528 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 SctrQ5FWI2 447 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Taar7aQ5QD12 358 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Phf12Q5SPL2 1003 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Brinp2Q6DFY8 783 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Pex11gQ6P6M5 241 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ube2q1Q7TSS2 422 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 LsampQ8BLK3 341 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Arfrp1Q8BXL7 201 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Fbxo48Q8CAT8 161 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Vmn1r228Q8R2A7 333 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Vmn1r52Q9EP79 309 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Zbtb32Q9JKD9 465 aa9.79□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 GmlE9PX31 176 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Vmn2r96E9PZU5 664 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Btbd16E9Q173 522 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Gm9857F7CXR1 130 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr631F8VPJ9 319 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Mid1O70583 680 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Rit1P70426 219 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 GnrhrQ01776 327 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Rcbtb1Q6NXM2 531 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Polr2mQ6P6I6 366 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Kiaa0895lQ810A5 467 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 FRRS1Q8K385 592 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Olfr516Q8VFZ5 314 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 PigkQ9CXY9 395 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 CrtapQ9CYD3 400 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 1700034I23RikQ9D9Q3 184 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Eif3kQ9DBZ5 218 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Il1rl2Q9ERS7 574 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Plag1Q9QYE0 499 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 MthfrQ9WU20 654 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Loxl3Q9Z175 754 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Pex11bQ9Z210 259 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Lrrc72A0A1Y7VMI0 288 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Fam83cA2ARK0 776 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Mllt6B1AR10 1109 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Ccrl2O35457 360 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Mapk14P47811 360 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Rab2aP53994 212 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Cd80Q00609 306 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Tstd2Q3U269 495 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Q3UY34 256 aa9.78□□□□□ -0.84
Ccdc40-201ENSMUST00000035935 Commd6Q3V4B5 87 aa9.78□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 83.6 ms