RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Spata13Q5DU57 656 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Lasp1Q61792 263 aaKnown RBP15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Fgl1Q71KU9 314 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Ptges2Q8BWM0 384 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Wdr26Q8C6G8 641 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Ppwd1Q8CEC6 646 aaKnown RBP15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Olfr478Q8VG04 314 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Olfr525Q8VGL5 309 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Col26a1Q91VF6 440 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Tmem159Q922Z1 161 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Sntg1Q925E1 517 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 TMEM121BQ99MX7 572 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Prkar1aQ9DBC7 381 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 AgtrapQ9WVK0 161 aa15.35■□□□□ 0.05
Trim28-201ENSMUST00000005705 Zfp969A2ART2 485 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Olfr619E9PV95 320 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Olfr681Q3SXH8 315 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 BspryQ80YW5 473 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Dcaf12l2Q8BGW4 469 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Sall4Q8BX22 1067 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Oard1Q8R5F3 152 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Ugt2b37Q8VCN3 530 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Olfr444Q8VFS6 310 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Olfr679Q8VGV0 315 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Tmed9Q99KF1 235 aaKnown RBP15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Exosc1Q9DAA6 195 aaKnown RBP15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Trim3Q9R1R2 744 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Sema4gQ9WUH7 837 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Mcm3apQ9WUU9 1971 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Piezo2Q8CD54 2822 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Vmn1r27K7N688 303 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 CaskO70589 926 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 GalP47212 124 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Polr2lP62876 67 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Gdf9Q07105 441 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Sez6l2Q4V9Z5 910 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 EgflamQ4VBE4 1017 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 RflnbQ5SVD0 216 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Nr2f1Q60632 422 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Dvl2Q60838 736 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Tmsb15lQ8C0W0 80 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 McatQ8R3F5 381 aaKnown RBP15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 AspaQ8R3P0 312 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Cd207Q8VBX4 331 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Ogfrl1Q8VE52 464 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Asb18Q8VHA6 467 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Cdhr1Q8VHP6 859 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Oosp1Q925U0 202 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Necab3Q9D6J4 353 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Slc7a9Q9QXA6 487 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Tinf2Q9QXG9 341 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Nfkb2Q9WTK5 899 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Mapk11Q9WUI1 364 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Coro1bQ9WUM3 484 aaKnown RBP15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Gm7145A0A087WS64 360 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 AU018091E9PWS4 684 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Olfr544E9PX47 334 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Vmn2r56E9Q4U5 779 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Rdh5O55240 318 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 F2rl3O88634 396 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Rps25P62852 125 aaKnown RBP15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Mal2Q8BI08 175 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Orai1Q8BWG9 304 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Samd7Q8C8Y5 445 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Tcf25Q8R3L2 676 aaKnown RBP15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Olfr1387Q8VFA9 311 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Olfr1052Q8VGR8 312 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Atg13Q91YI1 516 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Slamf9Q9D780 285 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Tlr1Q9EPQ1 795 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Tmem37Q9JJV3 211 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 PrelpQ9JK53 378 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Fem1aaQ9Z2G1 654 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 H2-BlV9GXR0 257 aa15.34■□□□□ 0.05
Trim28-201ENSMUST00000005705 Gm609E9Q573 300 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Slc27a6E9Q9W4 619 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Rgs5O08850 181 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Rpl7P14148 270 aaKnown RBP15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Il1r2P27931 410 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Usp30Q3UN04 517 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Orm1Q60590 207 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Sema4cQ64151 834 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 PdgfrlQ6PE55 375 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Tas2r38Q7TQA6 331 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Kcnmb1Q8CAE3 191 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Rnf121Q8R1Z9 327 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Lrrc3bQ8VCH9 259 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Olfr1033Q8VFK5 310 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Dusp7Q91Z46 422 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Uck2Q99PM9 261 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 2410137M14RikQ9CWF0 162 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Phf6Q9D4J7 364 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Ebna1bp2Q9D903 306 aaKnown RBP15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Sh3bgrlQ9JJU8 114 aaKnown RBP15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm33543A0A1B0GSI5 81 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm14744B1AVU4 173 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Zfp949E9Q732 603 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 PtgdsO09114 189 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Reps1O54916 795 aa15.33■□□□□ 0.04
Trim28-201ENSMUST00000005705 Alx3O70137 343 aa15.33■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms