RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Cdk10Q3UMM4 360 aa15.52■□□□□ 0.08
Shh-201ENSMUST00000002708 Spin1Q61142 262 aa15.52■□□□□ 0.08
Shh-201ENSMUST00000002708 Slc29a2Q61672 456 aa15.52■□□□□ 0.08
Shh-201ENSMUST00000002708 Trim45Q6PFY8 580 aa15.52■□□□□ 0.08
Shh-201ENSMUST00000002708 PrlhrQ6VMN6 370 aa15.52■□□□□ 0.08
Shh-201ENSMUST00000002708 Otop2Q80SX5 563 aa15.52■□□□□ 0.08
Shh-201ENSMUST00000002708 Mal2Q8BI08 175 aa15.52■□□□□ 0.08
Shh-201ENSMUST00000002708 Cmtr2Q8BWQ4 767 aa15.52■□□□□ 0.08
Shh-201ENSMUST00000002708 Pqlc3Q8C6U2 202 aa15.52■□□□□ 0.08
Shh-201ENSMUST00000002708 Mapre2Q8R001 326 aa15.52■□□□□ 0.08
Shh-201ENSMUST00000002708 Olfr633Q8VF02 312 aa15.52■□□□□ 0.08
Shh-201ENSMUST00000002708 Phf6Q9D4J7 364 aa15.52■□□□□ 0.08
Shh-201ENSMUST00000002708 DynapQ9D7M5 161 aa15.52■□□□□ 0.08
Shh-201ENSMUST00000002708 Rtp4Q9ER80 249 aaKnown RBP15.52■□□□□ 0.08
Shh-201ENSMUST00000002708 Mapk11Q9WUI1 364 aa15.52■□□□□ 0.08
Shh-201ENSMUST00000002708 Mfsd13bA0A1L1SUA2 455 aa15.52■□□□□ 0.07
Shh-201ENSMUST00000002708 Dcaf4A0A1Y7VNZ0 532 aa15.52■□□□□ 0.07
Shh-201ENSMUST00000002708 Skint2A7XUX6 400 aa15.52■□□□□ 0.07
Shh-201ENSMUST00000002708 Atp6ap1lD3Z5W0 336 aa15.52■□□□□ 0.07
Shh-201ENSMUST00000002708 Zfp607bG3X9H3 648 aa15.52■□□□□ 0.07
Shh-201ENSMUST00000002708 Nthl1O35980 300 aa15.52■□□□□ 0.07
Shh-201ENSMUST00000002708 Ppm1bP36993 390 aa15.52■□□□□ 0.07
Shh-201ENSMUST00000002708 Alox12eP55249 662 aa15.52■□□□□ 0.07
Shh-201ENSMUST00000002708 Rps25P62852 125 aaKnown RBP15.52■□□□□ 0.07
Shh-201ENSMUST00000002708 Fam109bQ14B98 259 aa15.52■□□□□ 0.07
Shh-201ENSMUST00000002708 Znf513Q6PD29 541 aa15.52■□□□□ 0.07
Shh-201ENSMUST00000002708 Cst13Q80ZN5 141 aa15.52■□□□□ 0.07
Shh-201ENSMUST00000002708 Trim23Q8BGX0 574 aa15.52■□□□□ 0.07
Shh-201ENSMUST00000002708 St7lQ8K4P7 559 aa15.52■□□□□ 0.07
Shh-201ENSMUST00000002708 Q8R3C1 574 aa15.52■□□□□ 0.07
Shh-201ENSMUST00000002708 Tram2Q924Z5 370 aa15.52■□□□□ 0.07
Shh-201ENSMUST00000002708 Cndp2Q9D1A2 475 aaKnown RBP15.52■□□□□ 0.07
Shh-201ENSMUST00000002708 Ephx1Q9D379 455 aa15.52■□□□□ 0.07
Shh-201ENSMUST00000002708 PolmQ9JIW4 496 aa15.52■□□□□ 0.07
Shh-201ENSMUST00000002708 Nfkb2Q9WTK5 899 aa15.52■□□□□ 0.07
Shh-201ENSMUST00000002708 Uba2Q9Z1F9 638 aa15.52■□□□□ 0.07
Shh-201ENSMUST00000002708 Igkv10-95A0A0G2JFY3 115 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 FcmrA1KXC4 422 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Mup18A2BIM8 181 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Vmn1r27K7N688 303 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Ephb6O08644 1014 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Gcm2O09102 504 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Mup11P04938 181 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Klrb1aP27811 227 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Guca1aP43081 202 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Hnrnpa1P49312 320 aaKnown RBP15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 OcmP51879 109 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 EvlP70429 414 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Fut4Q11127 433 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Gm21320Q4FZE8 181 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Taar7fQ5QD08 358 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Rbbp4Q60972 425 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Ffar1Q76JU9 300 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Sra1Q80VJ2 232 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Cadm2Q8BLQ9 435 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 PstkQ8BP74 359 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Ptges2Q8BWM0 384 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Tmem200aQ8C817 491 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Vmn1r75Q8R289 305 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Olfr1052Q8VGR8 312 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Naalad2Q9CZR2 740 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 5330417H12RikQ9D3P2 110 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Emc7Q9EP72 241 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Trappc4Q9ES56 219 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Anapc1P53995 1944 aaKnown RBP15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Gm5072A2AHM1 344 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Kcnmb3E9Q7U0 239 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Cyp2d37-psF6YKB5 150 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Olfr1249L7MU51 318 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Zp2P20239 713 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Hsf2P38533 535 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Resp18P47939 175 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Fmo1P50285 532 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Snrpd2P62317 118 aaKnown RBP15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Myl12bQ3THE2 172 aaKnown RBP15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Macrod2Q3UYG8 475 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Acat3Q80X81 397 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 4933430I17RikQ8BHW4 495 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Tceal5Q8CCT4 200 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 TapbplQ8VD31 451 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Txndc17Q9CQM5 123 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Mrpl19Q9D338 292 aaKnown RBP15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Pbld1Q9DCG6 288 aa15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 PrkraQ9WTX2 313 aaKnown RBP15.51■□□□□ 0.07
Shh-201ENSMUST00000002708 Gm28557A0A087WQQ0 336 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 D3Ertd254eA0A0G2JEM5 796 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Cytl1A1E5L0 139 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Zfp534A2A7A1 661 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Slc9a5B2RXE2 898 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Vmn1r12G5E8G1 307 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 DdostO54734 441 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Ccr3P51678 359 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Rab2bP59279 216 aaKnown RBP15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Gal3st3P61315 431 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Tas2r117Q7M715 330 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Galnt12Q8BGT9 576 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Ccdc187Q8C5V8 958 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Olfr380Q8VGT3 311 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 Vmn1r51Q8VIC6 319 aa15.5■□□□□ 0.07
Shh-201ENSMUST00000002708 TMEM121BQ99MX7 572 aa15.5■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 38.7 ms