RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 TMEM39AQ9NV64 488 aa13.02□□□□□ -0.33
PHGDH-233ENST00000642021 CNIH4Q9P003 139 aa13.02□□□□□ -0.33
PHGDH-233ENST00000642021 MALT1Q9UDY8 824 aa13.02□□□□□ -0.33
PHGDH-233ENST00000642021 GPR55Q9Y2T6 319 aaPredicted RBP13.02□□□□□ -0.33
PHGDH-233ENST00000642021 IGKV1-8A0A0C4DH67 115 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 SHISA3A0PJX4 238 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 C4orf51C9J302 202 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 CACNB4O00305 520 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-233ENST00000642021 PGRMC2O15173 223 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 NR2F6P10588 404 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 ACP2P11117 423 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 ACADMP11310 421 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 HOXB3P14651 431 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-233ENST00000642021 NCBP2P52298 156 aaKnown RBP eCLIP13.01□□□□□ -0.33
PHGDH-233ENST00000642021 SMSP52788 366 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 ARHGAP15Q53QZ3 475 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 DDI2Q5TDH0 399 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 PLPP4Q5VZY2 271 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 HSDL2Q6YN16 418 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 GDPD1Q8N9F7 314 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 TMEM163Q8TC26 289 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 DDX31Q9H8H2 851 aaKnown RBP13.01□□□□□ -0.33
PHGDH-233ENST00000642021 PAK6Q9NQU5 681 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-233ENST00000642021 SLC9A8Q9Y2E8 581 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 STK25O00506 426 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 PRODHO43272 600 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 SCO2O43819 266 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 VEGFDO43915 354 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 ERAL1O75616 437 aaKnown RBP13.01□□□□□ -0.33
PHGDH-233ENST00000642021 CH25HO95992 272 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 HMGN2P05204 90 aaKnown RBP13.01□□□□□ -0.33
PHGDH-233ENST00000642021 MYL9P24844 172 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 MTNR1AP48039 350 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 MNX1P50219 401 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-233ENST00000642021 CD83Q01151 205 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 P2RY14Q15391 338 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 KLHL22Q53GT1 634 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 OR4C11Q6IEV9 310 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 PAMR1Q6UXH9 720 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 QSOX2Q6ZRP7 698 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 ZNF765Q7L2R6 523 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 ADCK2Q7Z695 626 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 VWA5B2Q8N398 1253 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 ZNF485Q8NCK3 441 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 PRRC1Q96M27 445 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 FGF20Q9NP95 211 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-233ENST00000642021 SLC35C2Q9NQQ7 365 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 MRPS18AQ9NVS2 196 aaKnown RBP13.01□□□□□ -0.33
PHGDH-233ENST00000642021 TAS2R7Q9NYW3 318 aa13.01□□□□□ -0.33
PHGDH-233ENST00000642021 A0A0A6YYD5 115 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 TMEM129A0AVI4 362 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 OTOL1A6NHN0 477 aaPredicted RBP13□□□□□ -0.33
PHGDH-233ENST00000642021 NCR1O76036 304 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 C8orf89P0DMQ9 161 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 DDX6P26196 483 aaKnown RBP eCLIP13□□□□□ -0.33
PHGDH-233ENST00000642021 CSNK1G2P78368 415 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 RAB40BQ12829 278 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 GPAT3Q53EU6 434 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 TYW3Q6IPR3 259 aaKnown RBP13□□□□□ -0.33
PHGDH-233ENST00000642021 GRASPQ7Z6J2 395 aaPredicted RBP13□□□□□ -0.33
PHGDH-233ENST00000642021 CCDC116Q8IYX3 515 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 UBASH3BQ8TF42 649 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 ZNF296Q8WUU4 475 aaPredicted RBP13□□□□□ -0.33
PHGDH-233ENST00000642021 ZFYVE19Q96K21 471 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 QRFPRQ96P65 431 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 XKR8Q9H6D3 395 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 RNF121Q9H920 327 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 POLMQ9NP87 494 aaPredicted RBP13□□□□□ -0.33
PHGDH-233ENST00000642021 DNMT3AQ9Y6K1 912 aaPredicted RBP13□□□□□ -0.33
PHGDH-233ENST00000642021 ADH5P11766 374 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 PPP2R1BP30154 601 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 NDUFA9Q16795 377 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 FNDC3BQ53EP0 1204 aaKnown RBP13□□□□□ -0.33
PHGDH-233ENST00000642021 FAM46CQ5VWP2 391 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 SLC27A4Q6P1M0 643 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 ZNF438Q7Z4V0 828 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 OR4F15Q8NGB8 312 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 RSPRY1Q96DX4 576 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 SENP5Q96HI0 755 aaPredicted RBP13□□□□□ -0.33
PHGDH-233ENST00000642021 FRMD6Q96NE9 622 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 ARHGAP9Q9BRR9 750 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 MED18Q9BUE0 208 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 HDHD5Q9BXW7 423 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 CHST2Q9Y4C5 530 aa13□□□□□ -0.33
PHGDH-233ENST00000642021 NUP210Q8TEM1 1887 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-233ENST00000642021 LRIT2A6NDA9 550 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 DVL2O14641 736 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 SLC30A4O14863 429 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 LATO43561 262 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 HPGDSO60760 199 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 ALPPP05187 535 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 SSR2P43308 183 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 DBPQ10586 325 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-233ENST00000642021 MLC1Q15049 377 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 HNRNPA1L2Q32P51 320 aaKnown RBP12.99□□□□□ -0.33
PHGDH-233ENST00000642021 METRNLQ641Q3 311 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 PPP2R2DQ66LE6 453 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 KIAA1211LQ6NV74 962 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 NOXA1Q86UR1 476 aa12.99□□□□□ -0.33
PHGDH-233ENST00000642021 ESX1Q8N693 406 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms