RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 TEX28O15482 410 aa13.96□□□□□ -0.18
CACNA1A-220ENST00000635988 OR7A10O76100 309 aa13.96□□□□□ -0.18
CACNA1A-220ENST00000635988 IFNA7P01567 189 aa13.96□□□□□ -0.18
CACNA1A-220ENST00000635988 SLC6A11P48066 632 aa13.96□□□□□ -0.18
CACNA1A-220ENST00000635988 RAET1GQ6H3X3 334 aa13.96□□□□□ -0.18
CACNA1A-220ENST00000635988 HTR3DQ70Z44 454 aa13.96□□□□□ -0.18
CACNA1A-220ENST00000635988 KIF18BQ86Y91 864 aa13.96□□□□□ -0.18
CACNA1A-220ENST00000635988 MMP21Q8N119 569 aa13.96□□□□□ -0.18
CACNA1A-220ENST00000635988 KRT78Q8N1N4 520 aa13.96□□□□□ -0.18
CACNA1A-220ENST00000635988 SETD7Q8WTS6 366 aaKnown RBP13.96□□□□□ -0.18
CACNA1A-220ENST00000635988 NR4A3Q92570 626 aa13.96□□□□□ -0.18
CACNA1A-220ENST00000635988 OR2M2Q96R28 347 aa13.96□□□□□ -0.18
CACNA1A-220ENST00000635988 WFDC6Q9BQY6 131 aa13.96□□□□□ -0.18
CACNA1A-220ENST00000635988 GHITMQ9H3K2 345 aa13.96□□□□□ -0.18
CACNA1A-220ENST00000635988 C11orf49Q9H6J7 331 aa13.96□□□□□ -0.18
CACNA1A-220ENST00000635988 ZFP64Q9NPA5 681 aa13.96□□□□□ -0.18
CACNA1A-220ENST00000635988 SLAMF7Q9NQ25 335 aa13.96□□□□□ -0.18
CACNA1A-220ENST00000635988 MAN2C1Q9NTJ4 1040 aa13.96□□□□□ -0.18
CACNA1A-220ENST00000635988 RGS17Q9UGC6 210 aaPredicted RBP13.96□□□□□ -0.18
CACNA1A-220ENST00000635988 HELZP42694 1942 aaKnown RBP13.96□□□□□ -0.18
CACNA1A-220ENST00000635988 M0R3H8 397 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 LALBAP00709 142 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 RBMS1P29558 406 aaKnown RBP13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 PDHA2P29803 388 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 SOX18P35713 384 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 RFX3P48380 749 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 LRRC32Q14392 662 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 BCL2L15Q5TBC7 163 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 DBF4BQ8NFT6 615 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 OR9A1PQ8NGU1 263 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 GLYATL1Q969I3 302 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 OTUB1Q96FW1 271 aaPredicted RBP13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 GPA33Q99795 319 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 CLEC4MQ9H2X3 399 aaPredicted RBP13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 DPAGT1Q9H3H5 408 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 ZNF222Q9UK12 451 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 ITM2BQ9Y287 266 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 GPR52Q9Y2T5 361 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 NUBP2Q9Y5Y2 271 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 CACNG2Q9Y698 323 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 DNMT3AQ9Y6K1 912 aaPredicted RBP13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 ANAPC1Q9H1A4 1944 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 NR2F1P10589 423 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 ETV3P41162 512 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 FRKP42685 505 aaPredicted RBP13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 CCT3P49368 545 aaKnown RBP13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 BDH1Q02338 343 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 TMEM115Q12893 351 aaPredicted RBP13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 ZNF155Q12901 538 aaPredicted RBP13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 ARHGAP15Q53QZ3 475 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 TXNDC8Q6A555 127 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 HBMQ6B0K9 141 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 TMEM220Q6QAJ8 160 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 TIGD4Q8IY51 512 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 GJD3Q8N144 294 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 ZNF655Q8N720 491 aaPredicted RBP13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 BBS10Q8TAM1 723 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 CAMK1GQ96NX5 476 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 SORCS2Q96PQ0 1159 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 PLA2G12AQ9BZM1 189 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 EGLN3Q9H6Z9 239 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 SIRT3Q9NTG7 399 aaPredicted RBP13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 LIPT1Q9Y234 373 aa13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 EXOGQ9Y2C4 368 aaKnown RBP13.95□□□□□ -0.18
CACNA1A-220ENST00000635988 A0A1B0GVI7 797 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 SHISA3A0PJX4 238 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 MANSC4A6NHS7 340 aaPredicted RBP13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 I3L521 148 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 GRM6O15303 877 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 PI15O43692 258 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 CTSAP10619 480 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 PEPDP12955 493 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 AHCYP23526 432 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 ACSL1P33121 698 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 PITPNBP48739 271 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 CCL23P55773 120 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 PCBP4P57723 403 aaKnown RBP13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 MEF2AQ02078 507 aaPredicted RBP13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 HSF2Q03933 536 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 HSPB3Q12988 150 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 TSPAN31Q12999 210 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 CLLU1Q5K131 121 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 RASSF6Q6ZTQ3 369 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 SHFQ7M4L6 423 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 HGDQ93099 445 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 ZNF764Q96H86 408 aaPredicted RBP13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 RADILQ96JH8 1075 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 C17orf62Q9BQA9 187 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 JAM3Q9BX67 310 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 EPHX3Q9H6B9 360 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 ENAMQ9NRM1 1142 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 MED17Q9NVC6 651 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 COPZ2Q9P299 210 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 DOCK6Q96HP0 2047 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 RGS9O75916 674 aaPredicted RBP13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 IGHA1P01876 353 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 CD79BP40259 229 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 RNF144AP50876 292 aaPredicted RBP13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 EPHB3P54753 998 aa13.94□□□□□ -0.18
CACNA1A-220ENST00000635988 GNA13Q14344 377 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms