RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 CORO7P57737 925 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 PSME3P61289 254 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 PLIN5Q00G26 463 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 ALDH6A1Q02252 535 aaKnown RBP11.72□□□□□ -0.53
PNKP-217ENST00000625216 SRSF11Q05519 484 aaKnown RBP11.72□□□□□ -0.53
PNKP-217ENST00000625216 SLAMF1Q13291 335 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 ART3Q13508 389 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 CAPRIN1Q14444 709 aaKnown RBP11.72□□□□□ -0.53
PNKP-217ENST00000625216 MAPKAPK3Q16644 382 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 GTDC1Q4AE62 458 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 ZNF468Q5VIY5 522 aaPredicted RBP11.72□□□□□ -0.53
PNKP-217ENST00000625216 MTFR2Q6P444 385 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 DNAJC14Q6Y2X3 702 aaPredicted RBP11.72□□□□□ -0.53
PNKP-217ENST00000625216 HSDL2Q6YN16 418 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 DHDDSQ86SQ9 333 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 GPR180Q86V85 440 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 ANKRD46Q86W74 232 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 TICAM1Q8IUC6 712 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 GPALPP1Q8IXQ4 340 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 TMEM156Q8N614 296 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 POGLUT1Q8NBL1 392 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 PCYOX1LQ8NBM8 494 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 OR8J2Q8NGG1 315 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 OR8K3Q8NH51 312 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 PTPMT1Q8WUK0 201 aaPredicted RBP11.72□□□□□ -0.53
PNKP-217ENST00000625216 GTF2H4Q92759 462 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 TANKQ92844 425 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 NCLNQ969V3 563 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 ROPN1LQ96C74 230 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 PPCDCQ96CD2 204 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 COQ8BQ96D53 544 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 CLPTM1LQ96KA5 538 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 OR52E6Q96RD3 313 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 CSF3RQ99062 836 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 GPATCH1Q9BRR8 931 aaKnown RBP11.72□□□□□ -0.53
PNKP-217ENST00000625216 INPP5KQ9BT40 448 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 DUSP26Q9BV47 211 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 SERHLQ9NQF3 203 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 LYARQ9NX58 379 aaKnown RBP11.72□□□□□ -0.53
PNKP-217ENST00000625216 SLAMF8Q9P0V8 285 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 PHF11Q9UIL8 331 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 MAPRE3Q9UPY8 281 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 KLF13Q9Y2Y9 288 aaPredicted RBP11.72□□□□□ -0.53
PNKP-217ENST00000625216 ATG4BQ9Y4P1 393 aa11.72□□□□□ -0.53
PNKP-217ENST00000625216 NUP214P35658 2090 aaPredicted RBP11.72□□□□□ -0.53
PNKP-217ENST00000625216 TRBV5-3A0A0A0MS03 114 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 A0A1W2PR48 441 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 A1L4Q6 167 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 KLRC4-KLRK1H3BQV0 150 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 DYRK3O43781 588 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 TBX19O60806 448 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 ITGA10O75578 1167 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 PGM1P36871 562 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 RPL3P39023 403 aaKnown RBP11.71□□□□□ -0.53
PNKP-217ENST00000625216 CDKN2CP42773 168 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 CASP6P55212 293 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 PMP22Q01453 160 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 DLEU7Q6UYE1 221 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 R3HCC1LQ7Z5L2 792 aaKnown RBP11.71□□□□□ -0.53
PNKP-217ENST00000625216 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.71□□□□□ -0.53
PNKP-217ENST00000625216 ZNF227Q86WZ6 799 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 MSRB3Q8IXL7 192 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 CLECL1Q8IZS7 167 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 OR5L2Q8NGL0 311 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 CIDECQ96AQ7 238 aaPredicted RBP11.71□□□□□ -0.53
PNKP-217ENST00000625216 LRRC58Q96CX6 371 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 MTERF3Q96E29 417 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 GPR137Q96N19 417 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 FRMD6Q96NE9 622 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 THTPAQ9BU02 230 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 HES7Q9BYE0 225 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 TRIM8Q9BZR9 551 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 BHLHE41Q9C0J9 482 aaPredicted RBP11.71□□□□□ -0.53
PNKP-217ENST00000625216 PAIP1Q9H074 479 aaKnown RBP11.71□□□□□ -0.53
PNKP-217ENST00000625216 RPF2Q9H7B2 306 aaKnown RBP11.71□□□□□ -0.53
PNKP-217ENST00000625216 MIEF1Q9NQG6 463 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 SLC6A13Q9NSD5 602 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 RYDENQ9NUL5 291 aaKnown RBP11.71□□□□□ -0.53
PNKP-217ENST00000625216 FAM120CQ9NX05 1096 aaKnown RBP11.71□□□□□ -0.53
PNKP-217ENST00000625216 NDE1Q9NXR1 346 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 SH3BP4Q9P0V3 963 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 MYOTQ9UBF9 498 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 SUCOQ9UBS9 1254 aaKnown RBP11.71□□□□□ -0.53
PNKP-217ENST00000625216 ZNF223Q9UK11 482 aaPredicted RBP11.71□□□□□ -0.53
PNKP-217ENST00000625216 PACSIN3Q9UKS6 424 aa11.71□□□□□ -0.53
PNKP-217ENST00000625216 WBP11Q9Y2W2 641 aaKnown RBP11.71□□□□□ -0.53
PNKP-217ENST00000625216 CPAMD8Q8IZJ3 1885 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 UTP20O75691 2785 aaKnown RBP11.7□□□□□ -0.54
PNKP-217ENST00000625216 A0A096LPI6 279 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 TRGV8A0A0C4DH27 118 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 C17orf105B2RV13 164 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 LDB3O75112 727 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 PDE5AO76074 875 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 CLDN1O95832 211 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 PTPN6P29350 595 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 BUD31P41223 144 aaPredicted RBP11.7□□□□□ -0.54
PNKP-217ENST00000625216 CA7P43166 264 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 ALDH9A1P49189 494 aa11.7□□□□□ -0.54
PNKP-217ENST00000625216 ST13P50502 369 aaKnown RBP11.7□□□□□ -0.54
PNKP-217ENST00000625216 SSR4P51571 173 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms