RNA–Protein interactions for RNA: ENST00000623052.1

C9orf170-201, Transcript of chromosome 9 open reading frame 170, humanhuman

TSL 1 (best) BASIC

Gene C9orf170, Length 3,239 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf170-201ENST00000623052 SLC38A1Q9H2H9 487 aa12.55□□□□□ -0.4
C9orf170-201ENST00000623052 TIGARQ9NQ88 270 aa12.55□□□□□ -0.4
C9orf170-201ENST00000623052 MRPS18AQ9NVS2 196 aaKnown RBP12.55□□□□□ -0.4
C9orf170-201ENST00000623052 ZFR2Q9UPR6 939 aaKnown RBP12.55□□□□□ -0.4
C9orf170-201ENST00000623052 KLHL20Q9Y2M5 609 aa12.55□□□□□ -0.4
C9orf170-201ENST00000623052 CMAHPQ9Y471 501 aa12.55□□□□□ -0.4
C9orf170-201ENST00000623052 RPN2P04844 631 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 SMIM11AP58511 58 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 HOXC5Q00444 222 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 COX10Q12887 443 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 C3orf38Q5JPI3 329 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 TMEM64Q6YI46 380 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 TMPRSS11AQ6ZMR5 421 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 TMEM163Q8TC26 289 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 RNFT2Q96EX2 444 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 TM9SF2Q99805 663 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 RERGLQ9H628 205 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 C11orf49Q9H6J7 331 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 LIPT1Q9Y234 373 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 SPIN1Q9Y657 262 aaPredicted RBP12.54□□□□□ -0.4
C9orf170-201ENST00000623052 LIMS3P0CW19 117 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 LIMS4P0CW20 117 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 HIST1H1TP22492 207 aaPredicted RBP12.54□□□□□ -0.4
C9orf170-201ENST00000623052 MLLT1Q03111 559 aaPredicted RBP12.54□□□□□ -0.4
C9orf170-201ENST00000623052 ABHD17CQ6PCB6 329 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 ACOT4Q8N9L9 421 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 JPH3Q8WXH2 748 aaPredicted RBP12.54□□□□□ -0.4
C9orf170-201ENST00000623052 GATAD2BQ8WXI9 593 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 DIO2Q92813 273 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 ZNF649Q9BS31 505 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 SAP130Q9H0E3 1048 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 TP63Q9H3D4 680 aaPredicted RBP12.54□□□□□ -0.4
C9orf170-201ENST00000623052 OSGEPL1Q9H4B0 414 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 MARCH7Q9H992 704 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 NEK6Q9HC98 313 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 IMP3Q9NV31 184 aaKnown RBP12.54□□□□□ -0.4
C9orf170-201ENST00000623052 SPHK1Q9NYA1 384 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 SSR3Q9UNL2 185 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 A0A0B4J293 547 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 ERI3O43414 337 aaKnown RBP12.54□□□□□ -0.4
C9orf170-201ENST00000623052 UBXN7O94888 489 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 NFATC1O95644 943 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 ACP2P11117 423 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 FCARP24071 287 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 SDC2P34741 201 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 RAB28P51157 221 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 CAV3P56539 151 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 WNT4P56705 351 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 FABP5Q01469 135 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 CHRNEQ04844 493 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 DMPKQ09013 629 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 MADCAM1Q13477 382 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 LTB4RQ15722 352 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 SNAPC1Q16533 368 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 ZFP41Q8N8Y5 198 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 OR4Q3Q8NH05 313 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 SETD6Q8TBK2 473 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 SLC9A6Q92581 669 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 RNF31Q96EP0 1072 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 GIMAP5Q96F15 307 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 OR7D2Q96RA2 312 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 ARHGDIGQ99819 225 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 TRMT61BQ9BVS5 477 aaKnown RBP12.54□□□□□ -0.4
C9orf170-201ENST00000623052 FGF20Q9NP95 211 aaPredicted RBP12.54□□□□□ -0.4
C9orf170-201ENST00000623052 THAP10Q9P2Z0 257 aaPredicted RBP12.54□□□□□ -0.4
C9orf170-201ENST00000623052 APOBEC3BQ9UH17 382 aaKnown RBP12.54□□□□□ -0.4
C9orf170-201ENST00000623052 SLC9A8Q9Y2E8 581 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 PCDHGB2Q9Y5G2 931 aa12.54□□□□□ -0.4
C9orf170-201ENST00000623052 SHISA3A0PJX4 238 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 LINC01553A4QN01 128 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 SCAMP1O15126 338 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 CCNKO75909 580 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 IL1AP01583 271 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 FHP07954 510 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 CSF3P09919 207 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 MYOGP15173 224 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 ATP5A1P25705 553 aaKnown RBP12.53□□□□□ -0.4
C9orf170-201ENST00000623052 PPP2R1BP30154 601 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 MC3RP41968 323 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 WASP42768 502 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 OMPP47874 163 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 FZD5Q13467 585 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 TAB1Q15750 504 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 NDUFA9Q16795 377 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 C6orf132Q5T0Z8 1188 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 QSOX2Q6ZRP7 698 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 SIMC1Q8NDZ2 872 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 OR52E1Q8NGJ3 308 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 OR9A2Q8NGT5 310 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 SFXN5Q8TD22 340 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 SUSD6Q92537 303 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 TMCO6Q96DC7 493 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 FAM46AQ96IP4 442 aaKnown RBP12.53□□□□□ -0.4
C9orf170-201ENST00000623052 ST6GAL2Q96JF0 529 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 KATNB1Q9BVA0 655 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 PINK1Q9BXM7 581 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 MMP28Q9H239 520 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 NPAP1Q9NZP6 1156 aa12.53□□□□□ -0.4
C9orf170-201ENST00000623052 CPSF4LA6NMK7 179 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms