RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 KANTRA0A1W2PQU2 76 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 RGS9O75916 674 aaPredicted RBP15.31■□□□□ 0.04
GABRB3-215ENST00000622697 HMGN2P05204 90 aaKnown RBP15.31■□□□□ 0.04
GABRB3-215ENST00000622697 S100A6P06703 90 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 LCN1P31025 176 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 ARRB2P32121 409 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 EIF4HQ15056 248 aaKnown RBP15.31■□□□□ 0.04
GABRB3-215ENST00000622697 TMEM53Q6P2H8 277 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 FCAMRQ8WWV6 532 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 METTL8Q9H825 291 aaKnown RBP15.31■□□□□ 0.04
GABRB3-215ENST00000622697 TMEM45AQ9NWC5 275 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 ANKMY1Q9P2S6 941 aa15.31■□□□□ 0.04
GABRB3-215ENST00000622697 A0A0G2JPF8 293 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 HNRNPCL3B7ZW38 293 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 ZNF878C9JN71 531 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 HNRNPCL4P0DMR1 293 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 MAGEA8P43361 318 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 MAGEA12P43365 314 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 OC90Q02509 493 aaPredicted RBP15.3■□□□□ 0.04
GABRB3-215ENST00000622697 PLAG1Q6DJT9 500 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 TMPRSS12Q86WS5 348 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 RASGEF1AQ8N9B8 481 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 FAM83CQ9BQN1 747 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 ORAI3Q9BRQ5 295 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 GPR174Q9BXC1 333 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 IL23AQ9NPF7 189 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 ACOT13Q9NPJ3 140 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 PRH1P02810 166 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 PRKCDQ05655 676 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 C1orf94Q6P1W5 598 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 ISL2Q96A47 359 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 PDLIM5Q96HC4 596 aaKnown RBP15.3■□□□□ 0.04
GABRB3-215ENST00000622697 CUEDC1Q9NWM3 386 aaPredicted RBP15.3■□□□□ 0.04
GABRB3-215ENST00000622697 UPK1BO75841 260 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 RASGEF1BQ0VAM2 473 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 CDKL4Q5MAI5 379 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 SBSNQ6UWP8 590 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 FAM86B1Q8N7N1 296 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 INO80EQ8NBZ0 244 aaPredicted RBP15.3■□□□□ 0.04
GABRB3-215ENST00000622697 NUDT15Q9NV35 164 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 VNN3Q9NY84 501 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 SIPA1L3O60292 1781 aaPredicted RBP15.3■□□□□ 0.04
GABRB3-215ENST00000622697 ZNF701M0R085 212 aaPredicted RBP15.3■□□□□ 0.04
GABRB3-215ENST00000622697 C1orf105O95561 183 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 PIM1P11309 404 aaPredicted RBP15.3■□□□□ 0.04
GABRB3-215ENST00000622697 SLC6A11P48066 632 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 TMEM69Q5SWH9 247 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 SFRP4Q6FHJ7 346 aaPredicted RBP15.3■□□□□ 0.04
GABRB3-215ENST00000622697 TESCQ96BS2 214 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 CPPED1Q9BRF8 314 aaPredicted RBP15.3■□□□□ 0.04
GABRB3-215ENST00000622697 SDHAF3Q9NRP4 125 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 STARD5Q9NSY2 213 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 CCL26Q9Y258 94 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 CARD8Q9Y2G2 431 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 PLEKHA6Q9Y2H5 1048 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 A0A1B0GVC2 190 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 A6NIN4 97 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 ADAMTS4O75173 837 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 HCKP08631 526 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 HRH2P25021 359 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 DAPP51397 102 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 FIGLAQ6QHK4 219 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 SPRED1Q7Z699 444 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 MAELQ96JY0 434 aaKnown RBP15.3■□□□□ 0.04
GABRB3-215ENST00000622697 METTL7AQ9H8H3 244 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 TNFRSF12AQ9NP84 129 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 PGAP2Q9UHJ9 254 aa15.3■□□□□ 0.04
GABRB3-215ENST00000622697 PPP1R3DO95685 299 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 CDK1P06493 297 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 ZNF888P0CJ79 500 aaPredicted RBP15.29■□□□□ 0.04
GABRB3-215ENST00000622697 IL7P13232 177 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 FNTBP49356 437 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 ARPC4P59998 168 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 ALG10BQ5I7T1 473 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 OR5T3Q8NGG3 340 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 ACTRT3Q9BYD9 372 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 PLGP00747 810 aaPredicted RBP15.29■□□□□ 0.04
GABRB3-215ENST00000622697 MAS1P04201 325 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 ITGA5P08648 1049 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 CLDN2P57739 230 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 SYPL1Q16563 259 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 BORAQ6PGQ7 559 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 DPPA4Q7L190 304 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 GKN2Q86XP6 184 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 WFDC5Q8TCV5 224 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 SLC22A31A6NKX4 558 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 C12orf71A8MTZ7 269 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 PCSK6P29122 969 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 DSC1Q08554 894 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 NTRK2Q16620 822 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 PIP5KL1Q5T9C9 394 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 DNM1P34Q6PK57 102 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 TBPL2Q6SJ96 375 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 GPALPP1Q8IXQ4 340 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 GGHQ92820 318 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 DTD2Q96FN9 168 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 CPEB1Q9BZB8 566 aaKnown RBP15.29■□□□□ 0.04
GABRB3-215ENST00000622697 MARCH5Q9NX47 278 aa15.29■□□□□ 0.04
GABRB3-215ENST00000622697 USP36Q9P275 1121 aaKnown RBP15.29■□□□□ 0.04
GABRB3-215ENST00000622697 CD300AQ9UGN4 299 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms