RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 OTX2P32243 289 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 MAN2A2P49641 1150 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 SLC37A1P57057 533 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 FLOT2Q14254 428 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 ZCCHC12Q6PEW1 402 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 DTX1Q86Y01 620 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 PTRH1Q86Y79 214 aaKnown RBP16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 SLC16A11Q8NCK7 471 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 C16orf52Q8NHV5 167 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 WDR77Q9BQA1 342 aaPredicted RBP16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 NUDT9Q9BW91 350 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 FAM117AQ9C073 453 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 TMEM38AQ9H6F2 299 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 PRODH2Q9UF12 536 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 KCND3Q9UK17 655 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 SNX13Q9Y5W8 968 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 WDFY3Q8IZQ1 3526 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 SPTBN4Q9H254 2564 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 DUXAA6NLW8 204 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 ARPC2O15144 300 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 GMNNO75496 209 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 ALOX5P09917 674 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 ARAFP10398 606 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 LIPCP11150 499 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 SPINK2P20155 84 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 TRAP1Q12931 704 aaKnown RBP16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 SSPNQ14714 243 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 ZNHIT3Q15649 155 aaPredicted RBP16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 ZNF630Q2M218 657 aaPredicted RBP16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 DHFR2Q86XF0 187 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 SLC44A2Q8IWA5 706 aaPredicted RBP16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 B3GNT7Q8NFL0 401 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 OR1N1Q8NGS0 311 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 NFKBIDQ8NI38 313 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 FIG4Q92562 907 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 NCLNQ969V3 563 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 MUC13Q9H3R2 512 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 A4GALTQ9NPC4 353 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 WDR70Q9NW82 654 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 MAGEL2Q9UJ55 1249 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 DTX4Q9Y2E6 619 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 LRRC42Q9Y546 428 aa16.56■□□□□ 0.24
PTCHD3-202ENST00000622555 TMEM247A6NEH6 219 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 CXCR6O00574 342 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 ACOT8O14734 319 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 ASNA1O43681 348 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 GGT1P19440 569 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 PCGF2P35227 344 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 CDK6Q00534 326 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 SLC34A1Q06495 639 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 RBBP4Q09028 425 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 SCARB2Q14108 478 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 PCOLCEQ15113 449 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 RCN1Q15293 331 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 TGIF1Q15583 401 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 FXNQ16595 210 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 DUSP5Q16690 384 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 ATAD3BQ5T9A4 648 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 AAGABQ6PD74 315 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 NFAM1Q8NET5 270 aaPredicted RBP16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 CDS1Q92903 461 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 KIAA1143Q96AT1 154 aaPredicted RBP16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 SLC35A4Q96G79 324 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 VSTM2LQ96N03 204 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 SCNM1Q9BWG6 230 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 GPN2Q9H9Y4 310 aaPredicted RBP16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 STOML1Q9UBI4 398 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 P2RX2Q9UBL9 471 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 CFL2Q9Y281 166 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 MRPS18BQ9Y676 258 aaKnown RBP16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 KCNE3Q9Y6H6 103 aa16.55■□□□□ 0.24
PTCHD3-202ENST00000622555 IGHV1-45A0A0A0MS14 117 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 C5orf58C9J3I9 102 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 H0Y3Z8 333 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 SOCS6O14544 535 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 AGR2O95994 175 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 BCHEP06276 602 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 PLA2G5P39877 138 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 GPR143P51810 404 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 EXOSC6Q5RKV6 272 aaKnown RBP16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 GLYATQ6IB77 296 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 KIRREL2Q6UWL6 708 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 CYP2R1Q6VVX0 501 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 C16orf62Q7Z3J2 963 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 PPP1R32Q7Z5V6 425 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 HIPK4Q8NE63 616 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 GPR151Q8TDV0 419 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 SLC38A5Q8WUX1 472 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 STACQ99469 402 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 LMF2Q9BU23 707 aaKnown RBP16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 ITPAQ9BY32 194 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 ZNF700Q9H0M5 742 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 PIGUQ9H490 435 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 EXD2Q9NVH0 621 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 ACTR3BQ9P1U1 418 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 IL17BQ9UHF5 180 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 PCDHGA6Q9Y5G7 932 aa16.54■□□□□ 0.24
PTCHD3-202ENST00000622555 SLC28A2O43868 658 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 FKBP6O75344 327 aa16.53■□□□□ 0.24
PTCHD3-202ENST00000622555 TFPTP0C1Z6 253 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms