RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 CLDN6P56747 220 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 CHRNB3Q05901 458 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 EXOSC7Q15024 291 aaKnown RBP13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 ZNHIT3Q15649 155 aaPredicted RBP13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 TBCELQ5QJ74 424 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 MLIPQ5VWP3 458 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 HEPHL1Q6MZM0 1159 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 EIF3MQ7L2H7 374 aaKnown RBP13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 PRSS58Q8IYP2 241 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 SLC16A11Q8NCK7 471 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 SIMC1Q8NDZ2 872 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 OR14A16Q8NHC5 309 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 METTL21AQ8WXB1 218 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 SLC9A6Q92581 669 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 MR1Q95460 341 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 SENP5Q96HI0 755 aaPredicted RBP13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 PYURFQ96I23 114 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 FBXL20Q96IG2 436 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 TRNT1Q96Q11 434 aaKnown RBP13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 ZNF607Q96SK3 696 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 CNPPD1Q9BV87 410 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 BCL2L10Q9HD36 194 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 C6orf203Q9P0P8 240 aaPredicted RBP13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 STOML1Q9UBI4 398 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 PRODH2Q9UF12 536 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 CFL2Q9Y281 166 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 SPAARA0A1B0GVQ0 90 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 SLC28A2O43868 658 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 ALOX12BO75342 701 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 GCM2O75603 506 aaPredicted RBP13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 STK17BO94768 372 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 BAG2O95816 211 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 AK1P00568 194 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 FESP07332 822 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 CCNYL3P0C7X3 344 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 EMDP50402 254 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 PGDP52209 483 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 EFNA3P52797 238 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 EMP2P54851 167 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 NHLH1Q02575 133 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 MAPK11Q15759 364 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 LCN10Q6JVE6 187 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 BBS10Q8TAM1 723 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 FBXO30Q8TB52 745 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 RASSF5Q8WWW0 418 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 SLC35A4Q96G79 324 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 PHOX2BQ99453 314 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 TREX2Q9BQ50 279 aaPredicted RBP13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 LMF2Q9BU23 707 aaKnown RBP13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 BTBD2Q9BX70 525 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 OR10A5Q9H207 317 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 SOX17Q9H6I2 414 aaPredicted RBP13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 PADI1Q9ULC6 663 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 SATB2Q9UPW6 733 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 ERVK-19Q9WJR5 959 aa13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 HEMK1Q9Y5R4 338 aaPredicted RBP13.25□□□□□ -0.29
CLTCL1-212ENST00000622493 A0A0G2JPF8 293 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 PRAMEF27A3QJZ7 478 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 HNRNPCL2B2RXH8 293 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 HNRNPCL3B7ZW38 293 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 M0QX08 132 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 PCDH17O14917 1159 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 SUV39H1O43463 412 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 PRKD3O94806 890 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 NKX2-2O95096 273 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 LINGO3P0C6S8 592 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 HNRNPCL4P0DMR1 293 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 ACP2P11117 423 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 FCGR1AP12314 374 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 ETS2P15036 469 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 AQP1P29972 269 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 SSTR4P31391 388 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 SLC5A2P31639 672 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 SELENOWP63302 87 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 DUSP8Q13202 625 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 SYPL1Q16563 259 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 ARHGAP11BQ3KRB8 267 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 C6orf15Q6UXA7 325 aaPredicted RBP13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 C16orf62Q7Z3J2 963 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 KRT73Q86Y46 540 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 SLC44A2Q8IWA5 706 aaPredicted RBP13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 PQLC1Q8N2U9 271 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 ZNF615Q8N8J6 731 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 GALNT6Q8NCL4 622 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 MORN4Q8NDC4 146 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 DOK4Q8TEW6 326 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 LZICQ8WZA0 190 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 RNF31Q96EP0 1072 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 SEPHS2Q99611 448 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 SPATA5L1Q9BVQ7 753 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 SPRY4Q9C004 299 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 AKIRIN1Q9H9L7 192 aaPredicted RBP13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 C19orf25Q9UFG5 118 aaPredicted RBP13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 C3orf18Q9UK00 162 aa13.24□□□□□ -0.29
CLTCL1-212ENST00000622493 A8MVJ9 347 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 C9orf172C9J069 976 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 CNOT3O75175 753 aaKnown RBP13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 SERPINB7O75635 380 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 ZNF682O95780 498 aa13.23□□□□□ -0.29
CLTCL1-212ENST00000622493 DLGAP3O95886 979 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms