RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 TSC22D3Q99576 134 aa17.33■□□□□ 0.37
SEMA6C-210ENST00000621728 TGIF2Q9GZN2 237 aa17.33■□□□□ 0.37
SEMA6C-210ENST00000621728 RUBCNLQ9H714 662 aa17.33■□□□□ 0.37
SEMA6C-210ENST00000621728 CCM2LQ9NUG4 571 aaPredicted RBP17.33■□□□□ 0.37
SEMA6C-210ENST00000621728 ANAPC2Q9UJX6 822 aa17.33■□□□□ 0.37
SEMA6C-210ENST00000621728 DTX4Q9Y2E6 619 aa17.33■□□□□ 0.37
SEMA6C-210ENST00000621728 AP4B1Q9Y6B7 739 aa17.33■□□□□ 0.37
SEMA6C-210ENST00000621728 TCRBV16S1A1N1A0A5B0 115 aa17.33■□□□□ 0.36
SEMA6C-210ENST00000621728 C17orf105B2RV13 164 aa17.33■□□□□ 0.36
SEMA6C-210ENST00000621728 JMJD7P0C870 316 aa17.33■□□□□ 0.36
SEMA6C-210ENST00000621728 PSMA4P25789 261 aaKnown RBP17.33■□□□□ 0.36
SEMA6C-210ENST00000621728 MYBPC3Q14896 1274 aa17.33■□□□□ 0.36
SEMA6C-210ENST00000621728 DUSP5Q16690 384 aa17.33■□□□□ 0.36
SEMA6C-210ENST00000621728 TBCELQ5QJ74 424 aa17.33■□□□□ 0.36
SEMA6C-210ENST00000621728 DCAF12Q5T6F0 453 aa17.33■□□□□ 0.36
SEMA6C-210ENST00000621728 VTCN1Q7Z7D3 282 aa17.33■□□□□ 0.36
SEMA6C-210ENST00000621728 LGI4Q8N135 537 aa17.33■□□□□ 0.36
SEMA6C-210ENST00000621728 LRTOMTQ8WZ04 291 aa17.33■□□□□ 0.36
SEMA6C-210ENST00000621728 ZNF597Q96LX8 424 aa17.33■□□□□ 0.36
SEMA6C-210ENST00000621728 DEPDC7Q96QD5 511 aa17.33■□□□□ 0.36
SEMA6C-210ENST00000621728 OSBPL11Q9BXB4 747 aa17.33■□□□□ 0.36
SEMA6C-210ENST00000621728 GVINP1Q7Z2Y8 2422 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 IGHV3-20A0A0C4DH32 117 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 SMIM31A0A1B0GVY4 71 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 FAM149AA5PLN7 773 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 TMEM229AB2RXF0 380 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 DLL1O00548 723 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 AHCYL1O43865 530 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 FOXD2O60548 495 aaPredicted RBP17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 TNFAIP8O95379 198 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 ONECUT2O95948 504 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 CLPSP04118 112 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 GPIP06744 558 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 FESP07332 822 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 CHRM4P08173 479 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 UMPSP11172 480 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 FCGR1AP12314 374 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 ZNF26P17031 533 aaPredicted RBP17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 C3orf38Q5JPI3 329 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 REEP3Q6NUK4 255 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 CDC73Q6P1J9 531 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 MR1Q95460 341 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 TAMM41Q96BW9 452 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 RNF145Q96MT1 663 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 RSPO3Q9BXY4 272 aaPredicted RBP17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 ZNF696Q9H7X3 374 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 P2RX2Q9UBL9 471 aa17.32■□□□□ 0.36
SEMA6C-210ENST00000621728 IDSB3KWA1 339 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 C5orf58C9J3I9 102 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 PRKNO60260 465 aaPredicted RBP17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 PABPC4LP0CB38 370 aaKnown RBP17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 NR2F1P10589 423 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 EMDP50402 254 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 PCBP3P57721 371 aaKnown RBP17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 ZNF155Q12901 538 aaPredicted RBP17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 CYP27C1Q4G0S4 372 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 LIN52Q52LA3 116 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 MTX3Q5HYI7 312 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 OR52E4Q8NGH9 312 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 ADAMTS15Q8TE58 950 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 SPSB2Q99619 263 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 ANGPT4Q9Y264 503 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 CCDC187A0A096LP49 1063 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 VSTM2BA6NLU5 285 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 C9orf172C9J069 976 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 TMX2-CTNND1H3BSU7 103 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 M0QX08 132 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 PLD2O14939 933 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 STK17BO94768 372 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 DKK1O94907 266 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 SLITRK5O94991 958 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 PGM3O95394 542 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 HEXBP07686 556 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 CYBRD1Q53TN4 286 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 HMBOX1Q6NT76 420 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 MRPL14Q6P1L8 145 aaKnown RBP17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 FAM198BQ6UWH4 519 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 ERMP1Q7Z2K6 904 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 PIK3R3Q92569 461 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 SLC47A1Q96FL8 570 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 YIPF3Q9GZM5 350 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 SATB2Q9UPW6 733 aa17.31■□□□□ 0.36
SEMA6C-210ENST00000621728 ZIC2O95409 532 aaPredicted RBP17.3■□□□□ 0.36
SEMA6C-210ENST00000621728 TNFRSF1BP20333 461 aa17.3■□□□□ 0.36
SEMA6C-210ENST00000621728 AGXTP21549 392 aa17.3■□□□□ 0.36
SEMA6C-210ENST00000621728 NHLH1Q02575 133 aa17.3■□□□□ 0.36
SEMA6C-210ENST00000621728 FUT7Q11130 342 aa17.3■□□□□ 0.36
SEMA6C-210ENST00000621728 GPAT3Q53EU6 434 aa17.3■□□□□ 0.36
SEMA6C-210ENST00000621728 EXOSC6Q5RKV6 272 aaKnown RBP17.3■□□□□ 0.36
SEMA6C-210ENST00000621728 CCNJQ5T5M9 372 aa17.3■□□□□ 0.36
SEMA6C-210ENST00000621728 RNF220Q5VTB9 566 aa17.3■□□□□ 0.36
SEMA6C-210ENST00000621728 CBLL1Q75N03 491 aa17.3■□□□□ 0.36
SEMA6C-210ENST00000621728 CCDC80Q76M96 950 aa17.3■□□□□ 0.36
SEMA6C-210ENST00000621728 AMIGO2Q86SJ2 522 aa17.3■□□□□ 0.36
SEMA6C-210ENST00000621728 SMYD1Q8NB12 490 aa17.3■□□□□ 0.36
SEMA6C-210ENST00000621728 PLPP5Q8NEB5 264 aa17.3■□□□□ 0.36
SEMA6C-210ENST00000621728 SENP5Q96HI0 755 aaPredicted RBP17.3■□□□□ 0.36
SEMA6C-210ENST00000621728 TPD52L3Q96J77 140 aa17.3■□□□□ 0.36
SEMA6C-210ENST00000621728 HSH2DQ96JZ2 352 aa17.3■□□□□ 0.36
SEMA6C-210ENST00000621728 TAAR9Q96RI9 348 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms