RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 ARTNQ5T4W7 220 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 HACD4Q5VWC8 232 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 MSANTD2Q6P1R3 559 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 GPSM1Q86YR5 675 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 PUSL1Q8N0Z8 303 aaKnown RBP9.81□□□□□ -0.84
VPS11-207ENST00000620429 BPIFCQ8NFQ6 507 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 ARRDC2Q8TBH0 407 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 FAM120BQ96EK7 910 aaKnown RBP9.81□□□□□ -0.84
VPS11-207ENST00000620429 PEX11GQ96HA9 241 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 SEMA3CQ99985 751 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 NLNQ9BYT8 704 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 SLC25A32Q9H2D1 315 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 NSUN3Q9H649 340 aaKnown RBP9.81□□□□□ -0.84
VPS11-207ENST00000620429 MEX3AA1L020 520 aaKnown RBP9.81□□□□□ -0.84
VPS11-207ENST00000620429 OR6C68A6NDL8 312 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 POM121BA6NF01 834 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 SEPT4O43236 478 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 LCMT2O60294 686 aaKnown RBP9.81□□□□□ -0.84
VPS11-207ENST00000620429 NDUFS3O75489 264 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 ZNF682O95780 498 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 RECKO95980 971 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 ALDOBP05062 364 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 INHAP05111 366 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 HOXC4P09017 264 aaPredicted RBP9.81□□□□□ -0.84
VPS11-207ENST00000620429 S100A11P31949 105 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 SELENOPP49908 381 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 STARD6P59095 220 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 GK2Q14410 553 aaPredicted RBP9.81□□□□□ -0.84
VPS11-207ENST00000620429 UBXN2BQ14CS0 331 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 MAPKAPK3Q16644 382 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 RFTN2Q52LD8 501 aaPredicted RBP9.81□□□□□ -0.84
VPS11-207ENST00000620429 SFRP5Q5T4F7 317 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 MEDAGQ5VYS4 303 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 C22orf42Q6IC83 251 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 PHACTR4Q8IZ21 702 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 SPAG16Q8N0X2 631 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 SLC44A3Q8N4M1 653 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 KAT2AQ92830 837 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 TCEAL4Q96EI5 215 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 LCORQ96JN0 433 aaPredicted RBP9.81□□□□□ -0.84
VPS11-207ENST00000620429 HS6ST2Q96MM7 605 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 FAM193BQ96PV7 902 aaPredicted RBP9.81□□□□□ -0.84
VPS11-207ENST00000620429 UBL7Q96S82 380 aaPredicted RBP9.81□□□□□ -0.84
VPS11-207ENST00000620429 ZNF382Q96SR6 550 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 TRIM62Q9BVG3 475 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 C1QTNF3Q9BXJ4 246 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 HDHD2Q9H0R4 259 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 OPA3Q9H6K4 179 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 KLHL1Q9NR64 748 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 ZFP57Q9NU63 452 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 MED16Q9Y2X0 877 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 PCDHB7Q9Y5E2 793 aa9.81□□□□□ -0.84
VPS11-207ENST00000620429 DISC1C4P0D8 188 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 SLC19A2O60779 497 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 SIX6O95475 246 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 PPP3CBP16298 524 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 BPIP17213 487 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 CTNNB1P35222 781 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 RNF144AP50876 292 aaPredicted RBP9.8□□□□□ -0.84
VPS11-207ENST00000620429 CTBP2P56545 445 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 PTGR1Q14914 329 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 NCF4Q15080 339 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 PTPRNQ16849 979 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 FAM174BQ3ZCQ3 159 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 CDNFQ49AH0 187 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 OTOP2Q7RTS6 562 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 ARMC10Q8N2F6 343 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 OXR1Q8N573 874 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 NKAPQ8N5F7 415 aaKnown RBP9.8□□□□□ -0.84
VPS11-207ENST00000620429 PXT1Q8NFP0 134 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 OR52P1PQ8NH57 321 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 DNAJB8Q8NHS0 232 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 RFT1Q96AA3 541 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 CDKN2AIPNLQ96HQ2 116 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 C14orf144Q96I85 54 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 NELL2Q99435 816 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 TSNAXQ99598 290 aaKnown RBP9.8□□□□□ -0.84
VPS11-207ENST00000620429 ATF6BQ99941 703 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 TCF25Q9BQ70 676 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 POLR2J2Q9GZM3 115 aaKnown RBP9.8□□□□□ -0.84
VPS11-207ENST00000620429 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.8□□□□□ -0.84
VPS11-207ENST00000620429 ENKD1Q9H0I2 346 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 RNF122Q9H9V4 155 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 AKAP7Q9P0M2 348 aaPredicted RBP9.8□□□□□ -0.84
VPS11-207ENST00000620429 ATXN7L1Q9ULK2 861 aaPredicted RBP9.8□□□□□ -0.84
VPS11-207ENST00000620429 POFUT2Q9Y2G5 429 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 CHST2Q9Y4C5 530 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 WNT9AO14904 365 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 SSNA1O43805 119 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 FGF1P05230 155 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 PRKAR2AP13861 404 aaKnown RBP9.8□□□□□ -0.84
VPS11-207ENST00000620429 NDUFB7P17568 137 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 AHCYP23526 432 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 RPL38P63173 70 aaKnown RBP9.8□□□□□ -0.84
VPS11-207ENST00000620429 ABHD18Q0P651 414 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 HABP2Q14520 560 aaPredicted RBP9.8□□□□□ -0.84
VPS11-207ENST00000620429 SSPNQ14714 243 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 UAP1L1Q3KQV9 507 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 SDHAF4Q5VUM1 108 aa9.8□□□□□ -0.84
VPS11-207ENST00000620429 MZT2AQ6P582 158 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms