RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 KRTAP21-3Q3LHN1 58 aa18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 TCHHL1Q5QJ38 904 aaPredicted RBP18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 PAMR1Q6UXH9 720 aa18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 KIF18BQ86Y91 864 aa18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 TMEM151AQ8N4L1 468 aa18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 WDSUB1Q8N9V3 476 aa18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 LINC01560Q8TB33 94 aa18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 DCAKDQ8WVC6 231 aa18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 ALPK1Q96QP1 1244 aa18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 TUBA1CQ9BQE3 449 aa18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 FAIM2Q9BWQ8 316 aa18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 C1QTNF3Q9BXJ4 246 aa18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 HEY2Q9UBP5 337 aa18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 PRODH2Q9UF12 536 aa18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 TRPS1Q9UHF7 1281 aa18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 PSME2Q9UL46 239 aa18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 EXO1Q9UQ84 846 aaKnown RBP18.91■□□□□ 0.62
TRAPPC3-208ENST00000616074 FLNAP21333 2647 aaKnown RBP18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 PRAMEF25A6NGN4 478 aa18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 TRIM49D1C9J1S8 452 aa18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 POC1B-GALNT4F8VUJ3 575 aa18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 OR4F21O95013 312 aa18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 IL18BPO95998 194 aa18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 TMIGD3P0DMS9 266 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 CYP4B1P13584 511 aa18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 CPN1P15169 458 aa18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 DRD5P21918 477 aa18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 PPICP45877 212 aa18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 DCAF7P61962 342 aa18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 TRA2BP62995 288 aaKnown RBP18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 SORDQ00796 357 aa18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 FOXF2Q12947 444 aa18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 RDH11Q8TC12 318 aa18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 OR2B2Q9GZK3 357 aa18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 ANKRA2Q9H9E1 313 aa18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 DMGDHQ9UI17 866 aaKnown RBP18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 UTS2RQ9UKP6 389 aa18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 EDARQ9UNE0 448 aa18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 ZNF780BQ9Y6R6 833 aa18.9■□□□□ 0.62
TRAPPC3-208ENST00000616074 MED12LQ86YW9 2145 aa18.89■□□□□ 0.62
TRAPPC3-208ENST00000616074 FRG2CA6NGY1 282 aa18.89■□□□□ 0.61
TRAPPC3-208ENST00000616074 TO15178 435 aa18.89■□□□□ 0.61
TRAPPC3-208ENST00000616074 CBR3O75828 277 aa18.89■□□□□ 0.61
TRAPPC3-208ENST00000616074 GCKP35557 465 aa18.89■□□□□ 0.61
TRAPPC3-208ENST00000616074 DGKQP52824 942 aa18.89■□□□□ 0.61
TRAPPC3-208ENST00000616074 SRYQ05066 204 aa18.89■□□□□ 0.61
TRAPPC3-208ENST00000616074 FOXD4Q12950 439 aaPredicted RBP18.89■□□□□ 0.61
TRAPPC3-208ENST00000616074 ZNF628Q5EBL2 1059 aa18.89■□□□□ 0.61
TRAPPC3-208ENST00000616074 FBXW10Q5XX13 1052 aa18.89■□□□□ 0.61
TRAPPC3-208ENST00000616074 PLXDC2Q6UX71 529 aa18.89■□□□□ 0.61
TRAPPC3-208ENST00000616074 OR14L1PQ8NHC6 308 aa18.89■□□□□ 0.61
TRAPPC3-208ENST00000616074 UHMK1Q8TAS1 419 aaKnown RBP18.89■□□□□ 0.61
TRAPPC3-208ENST00000616074 TMBIM1Q969X1 311 aa18.89■□□□□ 0.61
TRAPPC3-208ENST00000616074 NMRK1Q9NWW6 199 aa18.89■□□□□ 0.61
TRAPPC3-208ENST00000616074 VPS29Q9UBQ0 182 aa18.89■□□□□ 0.61
TRAPPC3-208ENST00000616074 ZNF180Q9UJW8 692 aa18.89■□□□□ 0.61
TRAPPC3-208ENST00000616074 GPR55Q9Y2T6 319 aaPredicted RBP18.89■□□□□ 0.61
TRAPPC3-208ENST00000616074 H0Y3Z8 333 aa18.88■□□□□ 0.61
TRAPPC3-208ENST00000616074 MANBAO00462 879 aa18.88■□□□□ 0.61
TRAPPC3-208ENST00000616074 NME6O75414 186 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC3-208ENST00000616074 ESRRBO95718 433 aa18.88■□□□□ 0.61
TRAPPC3-208ENST00000616074 HSD17B3P37058 310 aa18.88■□□□□ 0.61
TRAPPC3-208ENST00000616074 GFRA1P56159 465 aa18.88■□□□□ 0.61
TRAPPC3-208ENST00000616074 HMGCS1Q01581 520 aa18.88■□□□□ 0.61
TRAPPC3-208ENST00000616074 CLCQ05315 142 aa18.88■□□□□ 0.61
TRAPPC3-208ENST00000616074 ADGRE4PQ86SQ3 457 aa18.88■□□□□ 0.61
TRAPPC3-208ENST00000616074 TRIM42Q8IWZ5 723 aa18.88■□□□□ 0.61
TRAPPC3-208ENST00000616074 CCDC116Q8IYX3 515 aa18.88■□□□□ 0.61
TRAPPC3-208ENST00000616074 CDYL2Q8N8U2 506 aa18.88■□□□□ 0.61
TRAPPC3-208ENST00000616074 ZNF675Q8TD23 568 aa18.88■□□□□ 0.61
TRAPPC3-208ENST00000616074 MBD6Q96DN6 1003 aa18.88■□□□□ 0.61
TRAPPC3-208ENST00000616074 COL21A1Q96P44 957 aa18.88■□□□□ 0.61
TRAPPC3-208ENST00000616074 FMO2Q99518 471 aa18.88■□□□□ 0.61
TRAPPC3-208ENST00000616074 PFDN4Q9NQP4 134 aa18.88■□□□□ 0.61
TRAPPC3-208ENST00000616074 MCM8Q9UJA3 840 aa18.88■□□□□ 0.61
TRAPPC3-208ENST00000616074 OR6C70A6NIJ9 312 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 ERN1O75460 977 aaKnown RBP18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 ATE1O95260 518 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 RAF1P04049 648 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 IL3P08700 152 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 HSD3B1P14060 373 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 CHN1P15882 459 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 HSD3B2P26439 372 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 ECHS1P30084 290 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 TEX35Q5T0J7 233 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 ENPP6Q6UWR7 440 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 CAMKMTQ7Z624 323 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 LUZP2Q86TE4 346 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 IFNEQ86WN2 208 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 PLCZ1Q86YW0 608 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 OR9A2Q8NGT5 310 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 IFT81Q8WYA0 676 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 TMCO6Q96DC7 493 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 SLC35A4Q96G79 324 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 BTBD9Q96Q07 612 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 G6PC3Q9BUM1 346 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 SFXN3Q9BWM7 321 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 RBM24Q9BX46 236 aaKnown RBP18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 TSPYL1Q9H0U9 437 aa18.87■□□□□ 0.61
TRAPPC3-208ENST00000616074 DLL4Q9NR61 685 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms