RNA–Protein interactions for RNA: ENST00000615505.4

SURF1-205, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 1 (best) BASIC

Gene SURF1, Length 991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-205ENST00000615505 VSTM2LQ96N03 204 aa23.31■■□□□ 1.32
SURF1-205ENST00000615505 TTTY12Q9BZ98 90 aa23.31■■□□□ 1.32
SURF1-205ENST00000615505 IL1RL2Q9HB29 575 aa23.31■■□□□ 1.32
SURF1-205ENST00000615505 ATAD3AQ9NVI7 634 aa23.31■■□□□ 1.32
SURF1-205ENST00000615505 ASIC5Q9NY37 505 aa23.31■■□□□ 1.32
SURF1-205ENST00000615505 CNOT11Q9UKZ1 510 aaKnown RBP23.31■■□□□ 1.32
SURF1-205ENST00000615505 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.31■■□□□ 1.32
SURF1-205ENST00000615505 RELNP78509 3460 aa23.31■■□□□ 1.32
SURF1-205ENST00000615505 ANKRD33BA6NCL7 494 aa23.3■■□□□ 1.32
SURF1-205ENST00000615505 HMGB1P1B2RPK0 211 aaPredicted RBP23.3■■□□□ 1.32
SURF1-205ENST00000615505 SLCO1B7G3V0H7 640 aa23.3■■□□□ 1.32
SURF1-205ENST00000615505 UPK1AO00322 258 aa23.3■■□□□ 1.32
SURF1-205ENST00000615505 ABCB1P08183 1280 aaPredicted RBP23.3■■□□□ 1.32
SURF1-205ENST00000615505 G6PDP11413 515 aa23.3■■□□□ 1.32
SURF1-205ENST00000615505 FRKP42685 505 aaPredicted RBP23.3■■□□□ 1.32
SURF1-205ENST00000615505 CPTPQ5TA50 214 aa23.3■■□□□ 1.32
SURF1-205ENST00000615505 NUP54Q7Z3B4 507 aa23.3■■□□□ 1.32
SURF1-205ENST00000615505 LRRC34Q8IZ02 419 aa23.3■■□□□ 1.32
SURF1-205ENST00000615505 SLC34A3Q8N130 599 aa23.3■■□□□ 1.32
SURF1-205ENST00000615505 NATD1Q8N6N6 113 aa23.3■■□□□ 1.32
SURF1-205ENST00000615505 OR7A2PQ8NGA2 310 aa23.3■■□□□ 1.32
SURF1-205ENST00000615505 SPPL2AQ8TCT8 520 aa23.3■■□□□ 1.32
SURF1-205ENST00000615505 OMA1Q96E52 524 aa23.3■■□□□ 1.32
SURF1-205ENST00000615505 MEAF6Q9HAF1 191 aa23.3■■□□□ 1.32
SURF1-205ENST00000615505 TUBA8Q9NY65 449 aaPredicted RBP23.3■■□□□ 1.32
SURF1-205ENST00000615505 MAPRE3Q9UPY8 281 aa23.3■■□□□ 1.32
SURF1-205ENST00000615505 A0A1B0GUH1 482 aa23.29■■□□□ 1.32
SURF1-205ENST00000615505 KLF11O14901 512 aa23.29■■□□□ 1.32
SURF1-205ENST00000615505 CT45A8P0DMV1 189 aa23.29■■□□□ 1.32
SURF1-205ENST00000615505 CT45A9P0DMV2 189 aa23.29■■□□□ 1.32
SURF1-205ENST00000615505 FOXO1Q12778 655 aa23.29■■□□□ 1.32
SURF1-205ENST00000615505 ZNF155Q12901 538 aaPredicted RBP23.29■■□□□ 1.32
SURF1-205ENST00000615505 C4orf17Q53FE4 359 aa23.29■■□□□ 1.32
SURF1-205ENST00000615505 CT45A2Q5DJT8 189 aa23.29■■□□□ 1.32
SURF1-205ENST00000615505 ZNF75CPQ92670 426 aaPredicted RBP23.29■■□□□ 1.32
SURF1-205ENST00000615505 DOHHQ9BU89 302 aa23.29■■□□□ 1.32
SURF1-205ENST00000615505 BOKQ9UMX3 212 aaPredicted RBP23.29■■□□□ 1.32
SURF1-205ENST00000615505 TRPC5OSA6NMA1 111 aa23.28■■□□□ 1.32
SURF1-205ENST00000615505 FAM166BA8MTA8 275 aa23.28■■□□□ 1.32
SURF1-205ENST00000615505 HDAC3O15379 428 aa23.28■■□□□ 1.32
SURF1-205ENST00000615505 SLC19A2O60779 497 aa23.28■■□□□ 1.32
SURF1-205ENST00000615505 NME6O75414 186 aaPredicted RBP23.28■■□□□ 1.32
SURF1-205ENST00000615505 GLSO94925 669 aaPredicted RBP23.28■■□□□ 1.32
SURF1-205ENST00000615505 LBPP18428 481 aa23.28■■□□□ 1.32
SURF1-205ENST00000615505 KRT20P35900 424 aa23.28■■□□□ 1.32
SURF1-205ENST00000615505 CASP6P55212 293 aa23.28■■□□□ 1.32
SURF1-205ENST00000615505 CLDN8P56748 225 aa23.28■■□□□ 1.32
SURF1-205ENST00000615505 CORO7P57737 925 aa23.28■■□□□ 1.32
SURF1-205ENST00000615505 OCRLQ01968 901 aa23.28■■□□□ 1.32
SURF1-205ENST00000615505 ZNHIT3Q15649 155 aaPredicted RBP23.28■■□□□ 1.32
SURF1-205ENST00000615505 HYAL4Q2M3T9 481 aa23.28■■□□□ 1.32
SURF1-205ENST00000615505 CMPK2Q5EBM0 449 aa23.28■■□□□ 1.32
SURF1-205ENST00000615505 PAOXQ6QHF9 649 aa23.28■■□□□ 1.32
SURF1-205ENST00000615505 SLC44A2Q8IWA5 706 aaPredicted RBP23.28■■□□□ 1.32
SURF1-205ENST00000615505 OR52N2Q8NGI0 321 aa23.28■■□□□ 1.32
SURF1-205ENST00000615505 SSC4DQ8WTU2 575 aa23.28■■□□□ 1.32
SURF1-205ENST00000615505 C3orf14Q9HBI5 128 aa23.28■■□□□ 1.32
SURF1-205ENST00000615505 ERRFI1Q9UJM3 462 aaPredicted RBP23.28■■□□□ 1.32
SURF1-205ENST00000615505 OR10H1Q9Y4A9 318 aa23.28■■□□□ 1.32
SURF1-205ENST00000615505 HIVEP3Q5T1R4 2406 aa23.28■■□□□ 1.32
SURF1-205ENST00000615505 LRRK2Q5S007 2527 aa23.27■■□□□ 1.32
SURF1-205ENST00000615505 LRRTM2O43300 516 aa23.27■■□□□ 1.32
SURF1-205ENST00000615505 CDC40O60508 579 aaKnown RBP eCLIP23.27■■□□□ 1.329e-7■■■□□ 18.5
SURF1-205ENST00000615505 REM1O75628 298 aa23.27■■□□□ 1.32
SURF1-205ENST00000615505 SNX4O95219 450 aa23.27■■□□□ 1.32
SURF1-205ENST00000615505 PSMG1O95456 288 aa23.27■■□□□ 1.32
SURF1-205ENST00000615505 KITP10721 976 aa23.27■■□□□ 1.32
SURF1-205ENST00000615505 LAMP1P11279 417 aa23.27■■□□□ 1.32
SURF1-205ENST00000615505 MLC1Q15049 377 aa23.27■■□□□ 1.32
SURF1-205ENST00000615505 TMEM198Q66K66 360 aa23.27■■□□□ 1.32
SURF1-205ENST00000615505 SPPL2CQ8IUH8 684 aa23.27■■□□□ 1.32
SURF1-205ENST00000615505 RIMKLAQ8IXN7 391 aa23.27■■□□□ 1.32
SURF1-205ENST00000615505 KRTCAP2Q8N6L1 136 aa23.27■■□□□ 1.32
SURF1-205ENST00000615505 CEP70Q8NHQ1 597 aa23.27■■□□□ 1.32
SURF1-205ENST00000615505 TMBIM1Q969X1 311 aa23.27■■□□□ 1.32
SURF1-205ENST00000615505 COQ8BQ96D53 544 aa23.27■■□□□ 1.32
SURF1-205ENST00000615505 JSRP1Q96MG2 331 aaPredicted RBP23.27■■□□□ 1.32
SURF1-205ENST00000615505 ANGPTL4Q9BY76 406 aa23.27■■□□□ 1.32
SURF1-205ENST00000615505 DEFB127Q9H1M4 99 aa23.27■■□□□ 1.32
SURF1-205ENST00000615505 PROK2Q9HC23 129 aa23.27■■□□□ 1.32
SURF1-205ENST00000615505 ZFP64Q9NPA5 681 aa23.27■■□□□ 1.32
SURF1-205ENST00000615505 MARCOQ9UEW3 520 aaPredicted RBP23.27■■□□□ 1.32
SURF1-205ENST00000615505 TRGV8A0A0C4DH27 118 aa23.26■■□□□ 1.31
SURF1-205ENST00000615505 A0A1W2PRB8 838 aa23.26■■□□□ 1.31
SURF1-205ENST00000615505 OR6C70A6NIJ9 312 aa23.26■■□□□ 1.31
SURF1-205ENST00000615505 TTC36A6NLP5 189 aa23.26■■□□□ 1.31
SURF1-205ENST00000615505 ABCB7O75027 752 aa23.26■■□□□ 1.31
SURF1-205ENST00000615505 ABOP16442 354 aa23.26■■□□□ 1.31
SURF1-205ENST00000615505 CASP3P42574 277 aa23.26■■□□□ 1.31
SURF1-205ENST00000615505 DIO3P55073 304 aa23.26■■□□□ 1.31
SURF1-205ENST00000615505 C21orf58P58505 322 aa23.26■■□□□ 1.31
SURF1-205ENST00000615505 C1QL3Q5VWW1 255 aa23.26■■□□□ 1.31
SURF1-205ENST00000615505 NPSR1Q6W5P4 371 aa23.26■■□□□ 1.31
SURF1-205ENST00000615505 LARP4Q71RC2 724 aaKnown RBP eCLIP23.26■■□□□ 1.313e-7■■■■□ 25.5
SURF1-205ENST00000615505 PACS2Q86VP3 889 aa23.26■■□□□ 1.31
SURF1-205ENST00000615505 WDR75Q8IWA0 830 aaKnown RBP23.26■■□□□ 1.31
SURF1-205ENST00000615505 FAM109AQ8N4B1 249 aa23.26■■□□□ 1.31
SURF1-205ENST00000615505 TMEM251Q8N6I4 163 aa23.26■■□□□ 1.31
SURF1-205ENST00000615505 HGDQ93099 445 aa23.26■■□□□ 1.31
SURF1-205ENST00000615505 TMCO6Q96DC7 493 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms