RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 FAM71E1Q6IPT2 247 aa23.06■■□□□ 1.28
VEGFA-227ENST00000615393 MEX3BQ6ZN04 569 aaKnown RBP23.06■■□□□ 1.28
VEGFA-227ENST00000615393 C10orf107Q8IVU9 208 aa23.06■■□□□ 1.28
VEGFA-227ENST00000615393 ACBD4Q8NC06 268 aa23.06■■□□□ 1.28
VEGFA-227ENST00000615393 OR1J4Q8NGS1 313 aa23.06■■□□□ 1.28
VEGFA-227ENST00000615393 OR2W6PQ8NHA6 318 aa23.06■■□□□ 1.28
VEGFA-227ENST00000615393 NTNG2Q96CW9 530 aa23.06■■□□□ 1.28
VEGFA-227ENST00000615393 APOPT1Q96IL0 206 aa23.06■■□□□ 1.28
VEGFA-227ENST00000615393 METTL2AQ96IZ6 378 aaKnown RBP23.06■■□□□ 1.28
VEGFA-227ENST00000615393 TRMOQ9BU70 441 aa23.06■■□□□ 1.28
VEGFA-227ENST00000615393 OSBPL11Q9BXB4 747 aa23.06■■□□□ 1.28
VEGFA-227ENST00000615393 UCK2Q9BZX2 261 aa23.06■■□□□ 1.28
VEGFA-227ENST00000615393 TNFRSF12AQ9NP84 129 aa23.06■■□□□ 1.28
VEGFA-227ENST00000615393 MYNNQ9NPC7 610 aa23.06■■□□□ 1.28
VEGFA-227ENST00000615393 KLRF1Q9NZS2 232 aa23.06■■□□□ 1.28
VEGFA-227ENST00000615393 NKX2-6A6NCS4 301 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 SLC28A1O00337 649 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 GNB5O14775 395 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 PLOD3O60568 738 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 TRIM13O60858 407 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 ABCB7O75027 752 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 UGT2B11O75310 529 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 ZFP36L2P47974 494 aaKnown RBP23.05■■□□□ 1.28
VEGFA-227ENST00000615393 VSNL1P62760 191 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 IFFO1Q0D2I5 559 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 PCLAFQ15004 111 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 TOMM20Q15388 145 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 CLEC6AQ6EIG7 209 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 NOXRED1Q6NXP6 359 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 ANGPTL8Q6UXH0 198 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 ULK2Q8IYT8 1036 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 TMBIM1Q969X1 311 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 TMCO6Q96DC7 493 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 COL21A1Q96P44 957 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 NODALQ96S42 347 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 ANKRA2Q9H9E1 313 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 TAS2R9Q9NYW1 312 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 DNAJC13O75165 2243 aa23.05■■□□□ 1.28
VEGFA-227ENST00000615393 PHF3Q92576 2039 aaKnown RBP23.04■■□□□ 1.28
VEGFA-227ENST00000615393 PRAMEF25A6NGN4 478 aa23.04■■□□□ 1.28
VEGFA-227ENST00000615393 OR6C70A6NIJ9 312 aa23.04■■□□□ 1.28
VEGFA-227ENST00000615393 MYO1GB0I1T2 1018 aa23.04■■□□□ 1.28
VEGFA-227ENST00000615393 ICOSLGO75144 302 aa23.04■■□□□ 1.28
VEGFA-227ENST00000615393 COQ9O75208 318 aa23.04■■□□□ 1.28
VEGFA-227ENST00000615393 ERN1O75460 977 aaKnown RBP23.04■■□□□ 1.28
VEGFA-227ENST00000615393 REM1O75628 298 aa23.04■■□□□ 1.28
VEGFA-227ENST00000615393 TOXO94900 526 aa23.04■■□□□ 1.28
VEGFA-227ENST00000615393 SLITRK5O94991 958 aa23.04■■□□□ 1.28
VEGFA-227ENST00000615393 NTSP30990 170 aa23.04■■□□□ 1.28
VEGFA-227ENST00000615393 KRT20P35900 424 aa23.04■■□□□ 1.28
VEGFA-227ENST00000615393 NCBP2P52298 156 aaKnown RBP eCLIP23.04■■□□□ 1.28
VEGFA-227ENST00000615393 DESI1Q6ICB0 168 aa23.04■■□□□ 1.28
VEGFA-227ENST00000615393 IKBIPQ70UQ0 350 aa23.04■■□□□ 1.28
VEGFA-227ENST00000615393 HOMEZQ8IX15 550 aa23.04■■□□□ 1.28
VEGFA-227ENST00000615393 PM20D2Q8IYS1 436 aa23.04■■□□□ 1.28
VEGFA-227ENST00000615393 ZNF295-AS1Q8N0V1 137 aa23.04■■□□□ 1.28
VEGFA-227ENST00000615393 OR7G2Q8NG99 324 aa23.04■■□□□ 1.28
VEGFA-227ENST00000615393 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.04■■□□□ 1.282e-10■■■■■ 37.7
VEGFA-227ENST00000615393 VSTM2LQ96N03 204 aa23.04■■□□□ 1.28
VEGFA-227ENST00000615393 GATA5Q9BWX5 397 aaPredicted RBP23.04■■□□□ 1.28
VEGFA-227ENST00000615393 FOLH1BQ9HBA9 442 aa23.04■■□□□ 1.28
VEGFA-227ENST00000615393 TAS2R7Q9NYW3 318 aa23.04■■□□□ 1.28
VEGFA-227ENST00000615393 CACNA1CQ13936 2221 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 A0A0G2JNJ9 132 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 AHRRA9YTQ3 701 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 AZIN1O14977 448 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 SNPHO15079 494 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 RGS14O43566 566 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 SEC22BO75396 215 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 CHEK2O96017 543 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 CT45A8P0DMV1 189 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 CT45A9P0DMV2 189 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 PRPH2P23942 346 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 PTPN6P29350 595 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 TFF3Q07654 80 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 CRYZQ08257 329 aaKnown RBP23.03■■□□□ 1.28
VEGFA-227ENST00000615393 CT45A2Q5DJT8 189 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 RIPPLY2Q5TAB7 128 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 TRABD2AQ86V40 505 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 C14orf79Q96F83 325 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 SLC35A4Q96G79 324 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 TREX2Q9BQ50 279 aaPredicted RBP23.03■■□□□ 1.28
VEGFA-227ENST00000615393 GALNT9Q9HCQ5 603 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 Q9UFV3 132 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 NCKAP5O14513 1909 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 EXPH5Q8NEV8 1989 aa23.03■■□□□ 1.28
VEGFA-227ENST00000615393 NINQ8N4C6 2090 aa23.02■■□□□ 1.28
VEGFA-227ENST00000615393 A0A087WV62 115 aa23.02■■□□□ 1.28
VEGFA-227ENST00000615393 JUNP05412 331 aaKnown RBP23.02■■□□□ 1.28
VEGFA-227ENST00000615393 MSX1P28360 303 aa23.02■■□□□ 1.28
VEGFA-227ENST00000615393 IL12BP29460 328 aa23.02■■□□□ 1.28
VEGFA-227ENST00000615393 PTGDSP41222 190 aa23.02■■□□□ 1.28
VEGFA-227ENST00000615393 CORO7P57737 925 aa23.02■■□□□ 1.28
VEGFA-227ENST00000615393 EFR3AQ14156 821 aa23.02■■□□□ 1.28
VEGFA-227ENST00000615393 SF3B4Q15427 424 aaKnown RBP eCLIP23.02■■□□□ 1.282e-10■■■□□ 18
VEGFA-227ENST00000615393 NHSL2Q5HYW2 709 aa23.02■■□□□ 1.28
VEGFA-227ENST00000615393 EMBQ6PCB8 327 aa23.02■■□□□ 1.28
VEGFA-227ENST00000615393 BANPQ8N9N5 519 aa23.02■■□□□ 1.28
VEGFA-227ENST00000615393 TIMP4Q99727 224 aa23.02■■□□□ 1.28
VEGFA-227ENST00000615393 ROPN1BQ9BZX4 212 aaPredicted RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms