RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 ADAM5Q6NVV9 412 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 CHST4Q8NCG5 386 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 OR10D4PQ8NGN7 298 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 GOT1L1Q8NHS2 421 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 BRIX1Q8TDN6 353 aaKnown RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 L3HYPDHQ96EM0 354 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 CLCC1Q96S66 551 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 GALNT9Q9HCQ5 603 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 BTNL2Q9UIR0 455 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 CA14Q9ULX7 337 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 FAM186AA6NE01 2351 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 MFSD2BA6NFX1 497 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 MAD2L1BPQ15013 274 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 FUT10Q6P4F1 479 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 MCEMP1Q8IX19 187 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 BRI3BPQ8WY22 251 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 FOXRED1Q96CU9 486 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 TRMT2BQ96GJ1 504 aaKnown RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 PPP1R16AQ96I34 528 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 RIOX1Q9H6W3 641 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 POLLQ9UGP5 575 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 NDRG2Q9UN36 371 aaKnown RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 CAMK2AQ9UQM7 478 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 RREB1Q92766 1687 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 OR5K4A6NMS3 321 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 NQO2P16083 231 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ARL2P36404 184 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 BUD31P41223 144 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 CTF1Q16619 201 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 PABPC1L2AQ5JQF8 200 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 TRMT11Q7Z4G4 463 aaKnown RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF383Q8NA42 475 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 BVESQ8NE79 360 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 OR5L2Q8NGL0 311 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 C22orf15Q8WYQ4 148 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ISCA1Q9BUE6 129 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 CREBZFQ9NS37 354 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 BET1LQ9NYM9 111 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ANK1P16157 1881 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 COL11A1P12107 1806 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 CACNB4O00305 520 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 METTL15P1P0C7V9 234 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 NME1P15531 152 aaKnown RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 NFYBP25208 207 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 GUCA1AP43080 201 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 SULT1A2P50226 295 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ZACNQ401N2 412 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 MLIPQ5VWP3 458 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 RABEPKQ7Z6M1 372 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 KDM8Q8N371 416 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 NEK7Q8TDX7 302 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ZBTB8AQ96BR9 441 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 PPCDCQ96CD2 204 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ACP6Q9NPH0 428 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 DDIT4Q9NX09 232 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF586Q9NXT0 402 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 NUDT4Q9NZJ9 180 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 GABRB1P18505 474 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 PTH2RP49190 550 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 GNG10P50151 68 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 PPA1Q15181 289 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 MARC1Q5VT66 337 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 C1orf87Q8N0U7 546 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ALOXE3Q9BYJ1 711 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 GHITMQ9H3K2 345 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 SLC2A9Q9NRM0 540 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 CACNA1DQ01668 2161 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 BLACEA4D250 179 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 FAM86B1E9PN63 330 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ERVH48-1M5A8F1 160 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 MGMTP16455 207 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 MLLT11Q13015 90 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 SERINC3Q13530 473 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 VASNQ6EMK4 673 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 SP8Q8IXZ3 490 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ADGRG2Q8IZP9 1017 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 IL12RB2Q99665 862 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 GPR88Q9GZN0 384 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 HEG1Q9ULI3 1381 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 C9JVG2 144 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 OR2T1O43869 369 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 CAPNS1P04632 268 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ALDOCP09972 364 aaKnown RBP4.72□□□□□ -1.65
VPS13D-213ENST00000613099 SPP1P10451 314 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ACVR2AP27037 513 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ARL3P36405 182 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 SCNN1AP37088 669 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 AQP2P41181 271 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 CHRNA4P43681 627 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 TLE3Q04726 772 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 HAGHQ16775 308 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 GPRC5AQ8NFJ5 357 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 SORCS1Q8WY21 1168 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ULBP1Q9BZM6 244 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 RAB9BQ9NP90 201 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 SIRT7Q9NRC8 400 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 LTBP4Q8N2S1 1624 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 ZNF804BA4D1E1 1349 aa4.72□□□□□ -1.65
VPS13D-213ENST00000613099 COL22A1Q8NFW1 1626 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms