RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 ENPP4Q9Y6X5 453 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 EXPH5Q8NEV8 1989 aa11.47□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 DNAH14Q0VDD8 3507 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TCRBV16S1A1N1A0A5B0 115 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 FAM149AA5PLN7 773 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SAC3D1A6NKF1 404 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 B4E171 279 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 G3V2T6 193 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 H0YAE9 185 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TGFBR3LH3BV60 316 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SOCS2O14508 198 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 PCDH17O14917 1159 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 STX11O75558 287 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ALPLP05186 524 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 FESP07332 822 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CHRM4P08173 479 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ACP2P11117 423 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 RPS4Y1P22090 263 aaKnown RBP11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 LCN1P31025 176 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CSTF2P33240 577 aaKnown RBP eCLIP11.46□□□□□ -0.578e-15■■■■□ 21.9
NEDD8-MDP1-203ENST00000604306 DCTP40126 519 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TSPAN7P41732 249 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 HMGA2P52926 109 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CASP9P55211 416 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SMIM11AP58511 58 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 PPP2R2BQ00005 443 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 MAT1AQ00266 395 aaKnown RBP11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 MC2RQ01718 297 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 RHAGQ02094 409 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ELAVL1Q15717 326 aaKnown RBP11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 LPAL2Q16609 132 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 TRMT12Q53H54 448 aaKnown RBP11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 EIPR1Q53HC9 387 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ARHGAP40Q5TG30 622 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ZNF385CQ66K41 422 aaPredicted RBP11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ZNF605Q86T29 641 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 CYP4Z1Q86W10 505 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 BMPERQ8N8U9 685 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SLC16A11Q8NCK7 471 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 OR14A16Q8NHC5 309 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SPPL2AQ8TCT8 520 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 RHBDD1Q8TEB9 315 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SLC35B4Q969S0 331 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SLC35A4Q96G79 324 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 C16orf58Q96GQ5 468 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 FBXL20Q96IG2 436 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 MAGED4Q96JG8 741 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ZNF570Q96NI8 536 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 COL21A1Q96P44 957 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 OR6C1Q96RD1 312 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ANKRD60Q9BZ19 345 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 POLR2J2Q9GZM3 115 aaKnown RBP11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 POLR2J3Q9H1A7 115 aaKnown RBP11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 RUBCNLQ9H714 662 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 REEP1Q9H902 201 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 RYDENQ9NUL5 291 aaKnown RBP11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 NDUFAF4Q9P032 175 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 AKAP7Q9P0M2 348 aaPredicted RBP11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 NDOR1Q9UHB4 597 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 ACAD8Q9UKU7 415 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 SLC9A8Q9Y2E8 581 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 PCDHGA1Q9Y5H4 931 aa11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 HEMK1Q9Y5R4 338 aaPredicted RBP11.46□□□□□ -0.57
NEDD8-MDP1-203ENST00000604306 MUC3AQ02505 3323 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 CDX4O14627 284 aaPredicted RBP11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 EI24O14681 340 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 KIAA0513O60268 411 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 CPNE3O75131 537 aaKnown RBP11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 E2F6O75461 281 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 SCRG1O75711 98 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 H6PDO95479 791 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 MT-ND1P03886 318 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 ALPPP05187 535 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 CT62P0C5K7 136 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 PABPC4LP0CB38 370 aaKnown RBP11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 CD59P13987 128 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 ALAS2P22557 587 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 EMDP50402 254 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 RPS6KA3P51812 740 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 ID2Q02363 134 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 DUSP8Q13202 625 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 DUSP5Q16690 384 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 SYT16Q17RD7 645 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 GPAT3Q53EU6 434 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 NHSL2Q5HYW2 709 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 FRRS1Q6ZNA5 592 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 RBM44Q6ZP01 1051 aaKnown RBP11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 PEX5LQ8IYB4 626 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 OR52R1Q8NGF1 315 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 DAZLQ92904 295 aaKnown RBP11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 DHRS1Q96LJ7 313 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 VSTM2LQ96N03 204 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 SDF2Q99470 211 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 PIP5K1AQ99755 562 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 SLC29A1Q99808 456 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 ZPBPQ9BS86 351 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 SLC7A5P2Q9GIP4 190 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 TMEM9BQ9NQ34 198 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 EQTNQ9NQ60 294 aa11.45□□□□□ -0.58
NEDD8-MDP1-203ENST00000604306 DHCR7Q9UBM7 475 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms