RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 TIA1P31483 386 aaKnown RBP eCLIP19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 TIMP3P35625 211 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 SOX18P35713 384 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 IST1P53990 364 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 FOXA1P55317 472 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 ACSM2AQ08AH3 577 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 SF3B4Q15427 424 aaKnown RBP eCLIP19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 WIPI1Q5MNZ9 446 aaPredicted RBP19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 ACSM2BQ68CK6 577 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 TIGD3Q6B0B8 471 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 DESI1Q6ICB0 168 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 SCIMPQ6UWF3 145 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 SH2D5Q6ZV89 423 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 LACC1Q8IV20 430 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 EPS8L3Q8TE67 593 aaKnown RBP19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 LRRC46Q96FV0 321 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 ZNF681Q96N22 645 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 GPATCH1Q9BRR8 931 aaKnown RBP19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 EBPLQ9BY08 206 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 PRDM14Q9GZV8 571 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 METTL7AQ9H8H3 244 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 PFDN4Q9NQP4 134 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 CRIM1Q9NZV1 1036 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 ZNF639Q9UID6 485 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 DLGAP4Q9Y2H0 992 aa19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 ANKHD1Q8IWZ3 2542 aaKnown RBP19.36■□□□□ 0.69
PPFIA3-209ENST00000602783 PRRC2AP48634 2157 aaKnown RBP19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 CDH16O75309 829 aa19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 CBX7O95931 251 aa19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 NAGAP17050 411 aa19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 PEX19P40855 299 aa19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 ASCL1P50553 236 aa19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 MRPS35P82673 323 aaKnown RBP19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 NSUN5P2Q63ZY6 315 aa19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 ANGPTL8Q6UXH0 198 aa19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 NUP54Q7Z3B4 507 aa19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 TDRPQ86YL5 185 aa19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 OR52R1Q8NGF1 315 aa19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 OR1J4Q8NGS1 313 aa19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 ABTB1Q969K4 478 aaPredicted RBP19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 CTHRC1Q96CG8 243 aa19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 NTNG2Q96CW9 530 aa19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 TRIB1Q96RU8 372 aa19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 SH3GL2Q99962 352 aa19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 UGT2B28Q9BY64 529 aa19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 PPCSQ9HAB8 311 aa19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 ZNF629Q9UEG4 869 aaPredicted RBP19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 PLLPQ9Y342 182 aa19.35■□□□□ 0.69
PPFIA3-209ENST00000602783 MED12Q93074 2177 aa19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 MPDZO75970 2070 aa19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 C2orf72A6NCS6 295 aa19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 PLIN3O60664 434 aa19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 DRD2P14416 443 aa19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 PCSK2P16519 638 aa19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 PTPN6P29350 595 aa19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 BTKQ06187 659 aa19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 CCDC153Q494R4 210 aa19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 TRMT12Q53H54 448 aaKnown RBP19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 NHSL2Q5HYW2 709 aa19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 POMZP3Q6PJE2 187 aa19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 FRMD7Q6ZUT3 714 aa19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 YRDCQ86U90 279 aaKnown RBP19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 C16orf78Q8WTQ4 265 aa19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 RNASE6Q93091 150 aaKnown RBP19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 HGDQ93099 445 aa19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 EXOSC8Q96B26 276 aaKnown RBP19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 OMA1Q96E52 524 aa19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 HSPBAP1Q96EW2 488 aa19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 WDYHV1Q96HA8 205 aa19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 LCORQ96JN0 433 aaPredicted RBP19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 NODALQ96S42 347 aa19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 C12orf65Q9H3J6 166 aaKnown RBP19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 LIME1Q9H400 295 aa19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 ITPR3Q14573 2671 aa19.34■□□□□ 0.69
PPFIA3-209ENST00000602783 SERTM1A2A2V5 107 aa19.33■□□□□ 0.68
PPFIA3-209ENST00000602783 ICOSLGO75144 302 aa19.33■□□□□ 0.68
PPFIA3-209ENST00000602783 CRHR1P34998 444 aa19.33■□□□□ 0.68
PPFIA3-209ENST00000602783 ZNF136P52737 540 aa19.33■□□□□ 0.68
PPFIA3-209ENST00000602783 NAGLUP54802 743 aa19.33■□□□□ 0.68
PPFIA3-209ENST00000602783 PLCXD2Q0VAA5 305 aa19.33■□□□□ 0.68
PPFIA3-209ENST00000602783 ZNF628Q5EBL2 1059 aa19.33■□□□□ 0.68
PPFIA3-209ENST00000602783 SPDYAQ5MJ70 313 aa19.33■□□□□ 0.68
PPFIA3-209ENST00000602783 DCST1Q5T197 706 aa19.33■□□□□ 0.68
PPFIA3-209ENST00000602783 SLC30A6Q6NXT4 461 aa19.33■□□□□ 0.68
PPFIA3-209ENST00000602783 GALNT18Q6P9A2 607 aa19.33■□□□□ 0.68
PPFIA3-209ENST00000602783 CCDC63Q8NA47 563 aa19.33■□□□□ 0.68
PPFIA3-209ENST00000602783 FAM83FQ8NEG4 500 aaPredicted RBP19.33■□□□□ 0.68
PPFIA3-209ENST00000602783 ZNF675Q8TD23 568 aa19.33■□□□□ 0.68
PPFIA3-209ENST00000602783 C11orf24Q96F05 449 aaPredicted RBP19.33■□□□□ 0.68
PPFIA3-209ENST00000602783 CLEC4MQ9H2X3 399 aaPredicted RBP19.33■□□□□ 0.68
PPFIA3-209ENST00000602783 RASSF1Q9NS23 344 aa19.33■□□□□ 0.68
PPFIA3-209ENST00000602783 CCM2LQ9NUG4 571 aaPredicted RBP19.33■□□□□ 0.68
PPFIA3-209ENST00000602783 EHD3Q9NZN3 535 aa19.33■□□□□ 0.68
PPFIA3-209ENST00000602783 GRID1Q9ULK0 1009 aa19.33■□□□□ 0.68
PPFIA3-209ENST00000602783 ZFHX3Q15911 3703 aa19.33■□□□□ 0.68
PPFIA3-209ENST00000602783 CD8B2A6NJW9 211 aa19.32■□□□□ 0.68
PPFIA3-209ENST00000602783 COPEO14579 308 aa19.32■□□□□ 0.68
PPFIA3-209ENST00000602783 CRCPO75575 148 aa19.32■□□□□ 0.68
PPFIA3-209ENST00000602783 ANXA4P09525 319 aaPredicted RBP19.32■□□□□ 0.68
PPFIA3-209ENST00000602783 PTGDSP41222 190 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms