RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 OR1F2PQ96R84 312 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 TRIB3Q96RU7 358 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 BCL7BQ9BQE9 202 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 GPR88Q9GZN0 384 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 TEX10Q9NXF1 929 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-217ENST00000602723 KCNIP1Q9NZI2 227 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 PPP4R1LQ9P1A2 415 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 PHRF1Q9P1Y6 1649 aaKnown RBP9.16□□□□□ -0.94
CSMD1-217ENST00000602723 CDK1P06493 297 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 INCA1Q0VD86 236 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 LSAMPQ13449 338 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 ERN2Q76MJ5 926 aaKnown RBP9.16□□□□□ -0.94
CSMD1-217ENST00000602723 OR52P1PQ8NH57 321 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 CDC6Q99741 560 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 COQ3Q9NZJ6 369 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 CNOT11Q9UKZ1 510 aaKnown RBP9.16□□□□□ -0.94
CSMD1-217ENST00000602723 MTCL1Q9Y4B5 1905 aaKnown RBP9.16□□□□□ -0.94
CSMD1-217ENST00000602723 SOWAHBA6NEL2 793 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 SLC16A5O15375 505 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 RAB3BP20337 219 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 SOX3P41225 446 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 NR4A2P43354 598 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 PSPHP78330 225 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 PLCXD2Q0VAA5 305 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 FGL2Q14314 439 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 PTPRCAPQ14761 206 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 NKPD1Q17RQ9 610 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 KCTD20Q7Z5Y7 419 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 IQCF1Q8N6M8 205 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 DNAJA3Q96EY1 480 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 SCAMP2O15127 329 aaKnown RBP9.16□□□□□ -0.94
CSMD1-217ENST00000602723 METTL11BQ5VVY1 283 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 CDCA2Q69YH5 1023 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-217ENST00000602723 CD99L2Q8TCZ2 262 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 SGTBQ96EQ0 304 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 MMABQ96EY8 250 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-217ENST00000602723 APMAPQ9HDC9 416 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 NALCNQ8IZF0 1738 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 AQP2P41181 271 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 PITPNBP48739 271 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 IDH3GP51553 393 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-217ENST00000602723 SNU13P55769 128 aaKnown RBP9.16□□□□□ -0.94
CSMD1-217ENST00000602723 ERVK-25P63136 954 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 OR5P2Q8WZ92 322 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 CHFRQ96EP1 664 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 HS6ST2Q96MM7 605 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 VRK1Q99986 396 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-217ENST00000602723 SYNPO2LQ9H987 977 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 UPK1BO75841 260 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 ADORA3P0DMS8 318 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 ECH1Q13011 328 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 ASPGQ86U10 573 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 ELMOD3Q96FG2 381 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 FEVQ99581 238 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 OR51J1Q9H342 316 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 HHATLQ9HCP6 504 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 TTLL8A6PVC2 850 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 ETV3P41162 512 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 PPA1Q15181 289 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 TECRLQ5HYJ1 363 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 COQ5Q5HYK3 327 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 DPY19L4Q7Z388 723 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 DCAF4L2Q8NA75 395 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 MAL2Q969L2 176 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 SAMD11Q96NU1 681 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 TGM7Q96PF1 710 aa9.16□□□□□ -0.94
CSMD1-217ENST00000602723 F5H5P2 479 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 GGT1P19440 569 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 GDI1P31150 447 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 POLR2HP52434 150 aaKnown RBP9.15□□□□□ -0.94
CSMD1-217ENST00000602723 GRIN2CQ14957 1233 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 FAM182AQ5T1J6 154 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 HES5Q5TA89 166 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 CMTM8Q8IZV2 173 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 ABHD11Q8NFV4 315 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 TRMT10AQ8TBZ6 339 aaKnown RBP9.15□□□□□ -0.94
CSMD1-217ENST00000602723 MAPK15Q8TD08 544 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 DCUN1D4Q92564 292 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 FKBP10Q96AY3 582 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 FAM86C1Q9NVL1 165 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 PEX10O60683 326 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 GALTP07902 379 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 DRD5P21918 477 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 CHATP28329 748 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 SHMT2P34897 504 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 DHPSP49366 369 aaPredicted RBP9.15□□□□□ -0.94
CSMD1-217ENST00000602723 MS4A15Q8N5U1 240 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 OR10T2Q8NGX3 314 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 SETD7Q8WTS6 366 aaKnown RBP9.15□□□□□ -0.94
CSMD1-217ENST00000602723 ALG8Q9BVK2 526 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 WDR6Q9NNW5 1121 aaKnown RBP9.15□□□□□ -0.94
CSMD1-217ENST00000602723 OIP5O43482 229 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 CAV2P51636 162 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 CDKN2DP55273 166 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 TRAM1L1Q8N609 369 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 KLHL13Q9P2N7 655 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 MT-CO2P00403 227 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 PIGRP01833 764 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 OPRL1P41146 370 aa9.15□□□□□ -0.94
CSMD1-217ENST00000602723 HNRNPKP61978 463 aaKnown RBP eCLIP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms