RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 HTR3AP46098 478 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 RFX2P48378 723 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 UBE3AQ05086 875 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 SLC27A4Q6P1M0 643 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 ABHD17CQ6PCB6 329 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 SLC36A4Q6YBV0 504 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 LAPTM4BQ86VI4 370 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 Q8N9G6 341 aaPredicted RBP13.59□□□□□ -0.23
SMG9-211ENST00000601170 GALNT6Q8NCL4 622 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 OR56A1Q8NGH5 318 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 OR8D4Q8NGM9 314 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 OR2L8Q8NGY9 312 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 TM9SF4Q92544 642 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 KLK6Q92876 244 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 RNFT2Q96EX2 444 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 SAP130Q9H0E3 1048 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 ABCB9Q9NP78 766 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 SLC6A20Q9NP91 592 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 EQTNQ9NQ60 294 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 TIGARQ9NQ88 270 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 FAM170BA6NMN3 283 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 ATP5A1P25705 553 aaKnown RBP13.59□□□□□ -0.23
SMG9-211ENST00000601170 CERS1P27544 350 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 RPS25P62851 125 aaKnown RBP13.59□□□□□ -0.23
SMG9-211ENST00000601170 RAB40BQ12829 278 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 GPR50Q13585 617 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 KRT33BQ14525 404 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 PDGFRLQ15198 375 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 ZNF311Q5JNZ3 666 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 NXNL2Q5VZ03 156 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 MRM1Q6IN84 353 aaKnown RBP13.59□□□□□ -0.23
SMG9-211ENST00000601170 ZNF544Q6NX49 715 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 PRICKLE2Q7Z3G6 844 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 UBQLNLQ8IYU4 475 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 FBXL6Q8N531 539 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 ZNF513Q8N8E2 541 aaPredicted RBP13.59□□□□□ -0.23
SMG9-211ENST00000601170 OR52E1Q8NGJ3 308 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 SMARCD2Q92925 531 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 OR7D2Q96RA2 312 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 ANKRA2Q9H9E1 313 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 NEK6Q9HC98 313 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 NPAP1Q9NZP6 1156 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 CNIH4Q9P003 139 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 SERGEFQ9UGK8 458 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 PLEKHM1Q9Y4G2 1056 aa13.59□□□□□ -0.23
SMG9-211ENST00000601170 LINC00854A0A1B0GVQ3 168 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 A0A1W2PQ09 198 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 CPSF4LA6NMK7 179 aaKnown RBP13.58□□□□□ -0.24
SMG9-211ENST00000601170 GPR89AB7ZAQ6 455 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 UBXN7O94888 489 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 NTN1O95631 604 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 GPR89BP0CG08 455 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 PRR5P85299 388 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 MLLT1Q03111 559 aaPredicted RBP13.58□□□□□ -0.24
SMG9-211ENST00000601170 CHRNEQ04844 493 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 MAP4K2Q12851 820 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 SF3B4Q15427 424 aaKnown RBP eCLIP13.58□□□□□ -0.242e-6■■■■□ 19.9
SMG9-211ENST00000601170 TAB1Q15750 504 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 FAM131AQ6UXB0 335 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 ZNF517Q6ZMY9 492 aaPredicted RBP13.58□□□□□ -0.24
SMG9-211ENST00000601170 SHFQ7M4L6 423 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 VRK2Q86Y07 508 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 CLDN22Q8N7P3 220 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 GNPDA2Q8TDQ7 276 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 CAPSLQ8WWF8 208 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 GATAD2BQ8WXI9 593 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 ZG16BQ96DA0 208 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 ZNF486Q96H40 463 aaPredicted RBP13.58□□□□□ -0.24
SMG9-211ENST00000601170 SLC38A1Q9H2H9 487 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 MIXL1Q9H2W2 232 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 MOV10Q9HCE1 1003 aaKnown RBP13.58□□□□□ -0.24
SMG9-211ENST00000601170 FGF20Q9NP95 211 aaPredicted RBP13.58□□□□□ -0.24
SMG9-211ENST00000601170 MRPS18AQ9NVS2 196 aaKnown RBP13.58□□□□□ -0.24
SMG9-211ENST00000601170 PLEKHB1Q9UF11 243 aaPredicted RBP13.58□□□□□ -0.24
SMG9-211ENST00000601170 GPR55Q9Y2T6 319 aaPredicted RBP13.58□□□□□ -0.24
SMG9-211ENST00000601170 GRIP1Q9Y3R0 1128 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 GOLGA4Q13439 2230 aaKnown RBP13.58□□□□□ -0.24
SMG9-211ENST00000601170 C2orf16Q68DN1 1984 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 MDC1Q14676 2089 aaKnown RBP13.58□□□□□ -0.24
SMG9-211ENST00000601170 TMEM129A0AVI4 362 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 SMIM30A4D0T7 59 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 LINC01553A4QN01 128 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 SNTNA6NMZ2 147 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 STK25O00506 426 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 AP3D1O14617 1153 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 GUCY1B2O75343 617 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 POU2F2P09086 479 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 RCVRNP35243 200 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 TRIM23P36406 574 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 MC3RP41968 323 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 MTNR1AP48039 350 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 RAB8AP61006 207 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 COPZ1P61923 177 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 FGL2Q14314 439 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 CST6Q15828 149 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 PLK5Q496M5 336 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 GLYR1Q49A26 553 aaPredicted RBP13.58□□□□□ -0.24
SMG9-211ENST00000601170 CLEC12AQ5QGZ9 265 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 SLC48A1Q6P1K1 146 aa13.58□□□□□ -0.24
SMG9-211ENST00000601170 SYT14Q8NB59 555 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms