RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 MDC1Q14676 2089 aaKnown RBP19.02■□□□□ 0.63
SHKBP1-225ENST00000600733 A0A1W2PQL4 384 aaPredicted RBP19.02■□□□□ 0.63
SHKBP1-225ENST00000600733 IL1AP01583 271 aa19.02■□□□□ 0.63
SHKBP1-225ENST00000600733 KRT8P05787 483 aa19.02■□□□□ 0.63
SHKBP1-225ENST00000600733 WASP42768 502 aa19.02■□□□□ 0.63
SHKBP1-225ENST00000600733 RAB28P51157 221 aa19.02■□□□□ 0.63
SHKBP1-225ENST00000600733 C3orf38Q5JPI3 329 aa19.02■□□□□ 0.63
SHKBP1-225ENST00000600733 KIAA1211LQ6NV74 962 aa19.02■□□□□ 0.63
SHKBP1-225ENST00000600733 ZNF544Q6NX49 715 aa19.02■□□□□ 0.63
SHKBP1-225ENST00000600733 LAPTM4BQ86VI4 370 aa19.02■□□□□ 0.63
SHKBP1-225ENST00000600733 ACOT4Q8N9L9 421 aa19.02■□□□□ 0.63
SHKBP1-225ENST00000600733 TMEM163Q8TC26 289 aa19.02■□□□□ 0.63
SHKBP1-225ENST00000600733 SMG7Q92540 1137 aaKnown RBP19.02■□□□□ 0.63
SHKBP1-225ENST00000600733 MS4A6EQ96DS6 147 aa19.02■□□□□ 0.63
SHKBP1-225ENST00000600733 C1GALT1C1Q96EU7 318 aa19.02■□□□□ 0.63
SHKBP1-225ENST00000600733 CAMK1GQ96NX5 476 aa19.02■□□□□ 0.63
SHKBP1-225ENST00000600733 SAP130Q9H0E3 1048 aa19.02■□□□□ 0.63
SHKBP1-225ENST00000600733 TP63Q9H3D4 680 aaPredicted RBP19.02■□□□□ 0.63
SHKBP1-225ENST00000600733 PLEKHM1Q9Y4G2 1056 aa19.02■□□□□ 0.63
SHKBP1-225ENST00000600733 ASB4Q9Y574 426 aa19.02■□□□□ 0.63
SHKBP1-225ENST00000600733 OR52A4PA6NMU1 304 aa19.01■□□□□ 0.63
SHKBP1-225ENST00000600733 MID1O15344 667 aa19.01■□□□□ 0.63
SHKBP1-225ENST00000600733 HIST1H1TP22492 207 aaPredicted RBP19.01■□□□□ 0.63
SHKBP1-225ENST00000600733 CD79BP40259 229 aa19.01■□□□□ 0.63
SHKBP1-225ENST00000600733 TAS2R41P59536 307 aa19.01■□□□□ 0.63
SHKBP1-225ENST00000600733 BNC1Q01954 994 aa19.01■□□□□ 0.63
SHKBP1-225ENST00000600733 KLHL22Q53GT1 634 aa19.01■□□□□ 0.63
SHKBP1-225ENST00000600733 ATAD3CQ5T2N8 411 aa19.01■□□□□ 0.63
SHKBP1-225ENST00000600733 PRICKLE2Q7Z3G6 844 aa19.01■□□□□ 0.63
SHKBP1-225ENST00000600733 LINC00471Q8N535 108 aa19.01■□□□□ 0.63
SHKBP1-225ENST00000600733 TEX47Q8TBZ9 253 aa19.01■□□□□ 0.63
SHKBP1-225ENST00000600733 WDR26Q9H7D7 661 aa19.01■□□□□ 0.63
SHKBP1-225ENST00000600733 SYNPO2LQ9H987 977 aa19.01■□□□□ 0.63
SHKBP1-225ENST00000600733 ZNF221Q9UK13 617 aa19.01■□□□□ 0.63
SHKBP1-225ENST00000600733 CPSF4LA6NMK7 179 aaKnown RBP19■□□□□ 0.63
SHKBP1-225ENST00000600733 AGRPO00253 132 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 TFECO14948 347 aaPredicted RBP19■□□□□ 0.63
SHKBP1-225ENST00000600733 PRODHO43272 600 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 AIFM1O95831 613 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 EIF2S1P05198 315 aaKnown RBP19■□□□□ 0.63
SHKBP1-225ENST00000600733 NR2F6P10588 404 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 ACP2P11117 423 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 CERS1P27544 350 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 DAB2P98082 770 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 GLYR1Q49A26 553 aaPredicted RBP19■□□□□ 0.63
SHKBP1-225ENST00000600733 SLC27A4Q6P1M0 643 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 TMEM64Q6YI46 380 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 VRK2Q86Y07 508 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 GATAD2AQ86YP4 633 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 RAB42Q8N4Z0 105 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 ZFP41Q8N8Y5 198 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 FAM46AQ96IP4 442 aaKnown RBP19■□□□□ 0.63
SHKBP1-225ENST00000600733 TEX101Q9BY14 249 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 MOV10Q9HCE1 1003 aaKnown RBP19■□□□□ 0.63
SHKBP1-225ENST00000600733 SLC6A20Q9NP91 592 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 PRDM7Q9NQW5 492 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 SERGEFQ9UGK8 458 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 ACSL5Q9ULC5 683 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 REV3LO60673 3130 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 FAM170BA6NMN3 283 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 A8MV72 311 aaPredicted RBP19■□□□□ 0.63
SHKBP1-225ENST00000600733 SCAMP1O15126 338 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 CASC3O15234 703 aaKnown RBP19■□□□□ 0.63
SHKBP1-225ENST00000600733 FHP07954 510 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 GSTM3P21266 225 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 TCEA1P23193 301 aaKnown RBP19■□□□□ 0.63
SHKBP1-225ENST00000600733 MTNR1AP48039 350 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 HOXC5Q00444 222 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 CHRNEQ04844 493 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 RAB40BQ12829 278 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 ZIC1Q15915 447 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 ZNF311Q5JNZ3 666 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 AGBL4Q5VU57 503 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 SLC36A4Q6YBV0 504 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 PINK1Q9BXM7 581 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 MMP28Q9H239 520 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 MRPS30Q9NP92 439 aaKnown RBP19■□□□□ 0.63
SHKBP1-225ENST00000600733 SEMA4GQ9NTN9 838 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 NPAP1Q9NZP6 1156 aa19■□□□□ 0.63
SHKBP1-225ENST00000600733 DNMT3AQ9Y6K1 912 aaPredicted RBP19■□□□□ 0.63
SHKBP1-225ENST00000600733 A0A0G2JPF8 293 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 HNRNPCL2B2RXH8 293 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 HNRNPCL3B7ZW38 293 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 PAK4O96013 591 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 HNRNPCL4P0DMR1 293 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 MC3RP41968 323 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 CAV3P56539 151 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 RAB8AP61006 207 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 IRF4Q15306 451 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 PLK5Q496M5 336 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 CRTC2Q53ET0 693 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 TMEM35AQ53FP2 167 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 ABHD17CQ6PCB6 329 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 FBXL6Q8N531 539 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 CAMKK1Q8N5S9 505 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 CLDN22Q8N7P3 220 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 DIRAS2Q96HU8 199 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 MSLNLQ96KJ4 702 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 KCTD7Q96MP8 289 aa18.99■□□□□ 0.63
SHKBP1-225ENST00000600733 OR7D2Q96RA2 312 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms