RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 CAPN7Q9Y6W3 813 aa17.45■□□□□ 0.38
CCDC9-205ENST00000600117 CPAMD8Q8IZJ3 1885 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 A0A1W2PP18 115 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 DYTNA2CJ06 578 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 A8MUI8 341 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 MKRN2OSH3BPM6 223 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 COQ9O75208 318 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 SNRPB2P08579 225 aaKnown RBP17.44■□□□□ 0.38
CCDC9-205ENST00000600117 GNLYP22749 145 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 PTPN6P29350 595 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 MLF1P58340 268 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 GAB1Q13480 694 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 MAPKAPK3Q16644 382 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 CRB2Q5IJ48 1285 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 PAGE3Q5JUK9 113 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 IRAK1BP1Q5VVH5 260 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 SLC2A7Q6PXP3 512 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 C16orf47Q6ZP98 133 aaPredicted RBP17.44■□□□□ 0.38
CCDC9-205ENST00000600117 RPS19BP1Q86WX3 136 aaKnown RBP17.44■□□□□ 0.38
CCDC9-205ENST00000600117 LGI4Q8N135 537 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 NUP43Q8NFH3 380 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 OR5L2Q8NGL0 311 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 THAP3Q8WTV1 239 aaPredicted RBP17.44■□□□□ 0.38
CCDC9-205ENST00000600117 ADIPOR1Q96A54 375 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 GIMAP5Q96F15 307 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 VSTM2LQ96N03 204 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 ITPAQ9BY32 194 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 CDCP1Q9H5V8 836 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 LIN28AQ9H9Z2 209 aaKnown RBP17.44■□□□□ 0.38
CCDC9-205ENST00000600117 C3orf14Q9HBI5 128 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 SLC6A13Q9NSD5 602 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 PCDHGB4Q9UN71 923 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 SNX8Q9Y5X2 465 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 SHANK1Q9Y566 2161 aa17.44■□□□□ 0.38
CCDC9-205ENST00000600117 HOXB9P17482 250 aaPredicted RBP17.43■□□□□ 0.38
CCDC9-205ENST00000600117 SOAT1P35610 550 aa17.43■□□□□ 0.38
CCDC9-205ENST00000600117 CCT3P49368 545 aaKnown RBP17.43■□□□□ 0.38
CCDC9-205ENST00000600117 ACER2Q5QJU3 275 aa17.43■□□□□ 0.38
CCDC9-205ENST00000600117 EXOSC6Q5RKV6 272 aaKnown RBP17.43■□□□□ 0.38
CCDC9-205ENST00000600117 SLC29A4Q7RTT9 530 aa17.43■□□□□ 0.38
CCDC9-205ENST00000600117 TREML1Q86YW5 311 aa17.43■□□□□ 0.38
CCDC9-205ENST00000600117 CLEC4FQ8N1N0 589 aa17.43■□□□□ 0.38
CCDC9-205ENST00000600117 SLC5A8Q8N695 610 aa17.43■□□□□ 0.38
CCDC9-205ENST00000600117 CCDC197Q8NCU1 140 aa17.43■□□□□ 0.38
CCDC9-205ENST00000600117 OR5AK3PQ8NH89 298 aa17.43■□□□□ 0.38
CCDC9-205ENST00000600117 HOXB13Q92826 284 aaPredicted RBP17.43■□□□□ 0.38
CCDC9-205ENST00000600117 ITCHQ96J02 903 aa17.43■□□□□ 0.38
CCDC9-205ENST00000600117 PANX1Q96RD7 426 aa17.43■□□□□ 0.38
CCDC9-205ENST00000600117 GAL3ST4Q96RP7 486 aa17.43■□□□□ 0.38
CCDC9-205ENST00000600117 SMAD5Q99717 465 aaKnown RBP17.43■□□□□ 0.38
CCDC9-205ENST00000600117 SLC25A23Q9BV35 468 aa17.43■□□□□ 0.38
CCDC9-205ENST00000600117 PAIP1Q9H074 479 aaKnown RBP17.43■□□□□ 0.38
CCDC9-205ENST00000600117 EPS8L2Q9H6S3 715 aa17.43■□□□□ 0.38
CCDC9-205ENST00000600117 RMND5AQ9H871 391 aa17.43■□□□□ 0.38
CCDC9-205ENST00000600117 FOLH1BQ9HBA9 442 aa17.43■□□□□ 0.38
CCDC9-205ENST00000600117 ZCCHC3Q9NUD5 404 aaKnown RBP17.43■□□□□ 0.38
CCDC9-205ENST00000600117 MYOTQ9UBF9 498 aa17.43■□□□□ 0.38
CCDC9-205ENST00000600117 PRODH2Q9UF12 536 aa17.43■□□□□ 0.38
CCDC9-205ENST00000600117 CFL2Q9Y281 166 aa17.43■□□□□ 0.38
CCDC9-205ENST00000600117 C2orf92A0A1B0GVN3 265 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 K7EM74 188 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 NDUFAB1O14561 156 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 RFXANKO14593 260 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 ZNF354AO60765 605 aaPredicted RBP17.42■□□□□ 0.38
CCDC9-205ENST00000600117 NADKO95544 446 aaPredicted RBP17.42■□□□□ 0.38
CCDC9-205ENST00000600117 ZCCHC18P0CG32 403 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 UQCRC2P22695 453 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 MAP3K8P41279 467 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 TRPC1P48995 793 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 PRR5P85299 388 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 SPDYE7PQ495Y7 208 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 GTDC1Q4AE62 458 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 AGAP7PQ5VUJ5 663 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 ISLR2Q6UXK2 745 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 DNAJC14Q6Y2X3 702 aaPredicted RBP17.42■□□□□ 0.38
CCDC9-205ENST00000600117 ASB18Q6ZVZ8 466 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 RETREG3Q86VR2 466 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 C17orf47Q8NEP4 570 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 OR56A1Q8NGH5 318 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 BCAS4Q8TDM0 211 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 MOAP1Q96BY2 351 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 ZNF354BQ96LW1 612 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 AGAP4Q96P64 663 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 MS4A4EQ96PG1 132 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 PHF12Q96QT6 1004 aa17.42■□□□□ 0.38
CCDC9-205ENST00000600117 APCP25054 2843 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 RNF103-CHMP3A0A140T963 221 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 WWP2O00308 870 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 FBP2O00757 339 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 C1QCP02747 245 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 GSNP06396 782 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 PPICP45877 212 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 PRKAG1P54619 331 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 ZNF155Q12901 538 aaPredicted RBP17.41■□□□□ 0.38
CCDC9-205ENST00000600117 MFAP5Q13361 173 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 MEP1AQ16819 746 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 PIGGQ5H8A4 983 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 LRIF1Q5T3J3 769 aa17.41■□□□□ 0.38
CCDC9-205ENST00000600117 SAXO2Q658L1 398 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms