RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 DDX18Q9NVP1 670 aaKnown RBP12.74□□□□□ -0.37
UPF1-205ENST00000598209 TUBA8Q9NY65 449 aaPredicted RBP12.74□□□□□ -0.37
UPF1-205ENST00000598209 TAS2R9Q9NYW1 312 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 NOP53Q9NZM5 478 aaKnown RBP12.74□□□□□ -0.37
UPF1-205ENST00000598209 ERRFI1Q9UJM3 462 aaPredicted RBP12.74□□□□□ -0.37
UPF1-205ENST00000598209 C19orf53Q9UNZ5 99 aaPredicted RBP12.74□□□□□ -0.37
UPF1-205ENST00000598209 FLNCQ14315 2725 aa12.74□□□□□ -0.37
UPF1-205ENST00000598209 FAM166BA8MTA8 275 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 ACOT7O00154 380 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 UPK1AO00322 258 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 TO15178 435 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 GLSO94925 669 aaPredicted RBP12.73□□□□□ -0.37
UPF1-205ENST00000598209 ABCB1P08183 1280 aaPredicted RBP12.73□□□□□ -0.37
UPF1-205ENST00000598209 IFI6P09912 130 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 CT45A8P0DMV1 189 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 CT45A9P0DMV2 189 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 G6PDP11413 515 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 NAGAP17050 411 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 EFNA1P20827 205 aaPredicted RBP12.73□□□□□ -0.37
UPF1-205ENST00000598209 MANFP55145 182 aaKnown RBP12.73□□□□□ -0.37
UPF1-205ENST00000598209 CORO7P57737 925 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 KCNJ2P63252 427 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 HSF1Q00613 529 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 FOXO1Q12778 655 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 C4orf17Q53FE4 359 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 CT45A2Q5DJT8 189 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 CMPK2Q5EBM0 449 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 NPSR1Q6W5P4 371 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 BNC2Q6ZN30 1099 aaPredicted RBP12.73□□□□□ -0.37
UPF1-205ENST00000598209 RGS9BPQ6ZS82 235 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 SLC22A16Q86VW1 577 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 SLC34A3Q8N130 599 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 OR2L13Q8N349 312 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 KRTCAP2Q8N6L1 136 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 OR52N2Q8NGI0 321 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 DIO2Q92813 273 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 MEAF6Q9HAF1 191 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 IL1RL2Q9HB29 575 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 ACSS1Q9NUB1 689 aaPredicted RBP12.73□□□□□ -0.37
UPF1-205ENST00000598209 ASIC5Q9NY37 505 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 MARCOQ9UEW3 520 aaPredicted RBP12.73□□□□□ -0.37
UPF1-205ENST00000598209 SLC5A6Q9Y289 635 aa12.73□□□□□ -0.37
UPF1-205ENST00000598209 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.73□□□□□ -0.37
UPF1-205ENST00000598209 ANKRD33BA6NCL7 494 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 HMGB1P1B2RPK0 211 aaPredicted RBP12.72□□□□□ -0.37
UPF1-205ENST00000598209 LRRTM2O43300 516 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 CDC40O60508 579 aaKnown RBP eCLIP12.72□□□□□ -0.37
UPF1-205ENST00000598209 SLC19A2O60779 497 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 PSMG1O95456 288 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 KITP10721 976 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 LAMP1P11279 417 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 LBPP18428 481 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 PRPS1L1P21108 318 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 CDK9P50750 372 aaKnown RBP12.72□□□□□ -0.37
UPF1-205ENST00000598209 RPP38P78345 283 aaKnown RBP12.72□□□□□ -0.37
UPF1-205ENST00000598209 OCRLQ01968 901 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.72□□□□□ -0.37
UPF1-205ENST00000598209 TBCELQ5QJ74 424 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 CPTPQ5TA50 214 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 C1QL3Q5VWW1 255 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 BICRALQ6AI39 1079 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 DESI1Q6ICB0 168 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 SLC44A2Q8IWA5 706 aaPredicted RBP12.72□□□□□ -0.37
UPF1-205ENST00000598209 RIMKLAQ8IXN7 391 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 TMEM251Q8N6I4 163 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 SSC4DQ8WTU2 575 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 NUDT8Q8WV74 236 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 ZNF75CPQ92670 426 aaPredicted RBP12.72□□□□□ -0.37
UPF1-205ENST00000598209 TMBIM1Q969X1 311 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 SECISBP2Q96T21 854 aaKnown RBP12.72□□□□□ -0.37
UPF1-205ENST00000598209 DOHHQ9BU89 302 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 DEFB127Q9H1M4 99 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 ATAD3AQ9NVI7 634 aa12.72□□□□□ -0.37
UPF1-205ENST00000598209 BOKQ9UMX3 212 aaPredicted RBP12.72□□□□□ -0.37
UPF1-205ENST00000598209 TRGV8A0A0C4DH27 118 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 A0A1B0GUH1 482 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 SDHDO14521 159 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 KLF11O14901 512 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 HDAC3O15379 428 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 ZNHIT1O43257 154 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 UGT2B11O75310 529 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 REM1O75628 298 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 SASH3O75995 380 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 PDE9AO76083 593 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 RNF224P0DH78 156 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 CASP3P42574 277 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 MAGEA5P43359 124 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 DIO3P55073 304 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 CLDN8P56748 225 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 C21orf58P58505 322 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 PSPHP78330 225 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 PSG6Q00889 435 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 MLC1Q15049 377 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 HYAL4Q2M3T9 481 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 LARP4Q71RC2 724 aaKnown RBP eCLIP12.71□□□□□ -0.37
UPF1-205ENST00000598209 NUP54Q7Z3B4 507 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 WDR53Q7Z5U6 358 aaPredicted RBP12.71□□□□□ -0.37
UPF1-205ENST00000598209 FJX1Q86VR8 437 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 SPPL2CQ8IUH8 684 aa12.71□□□□□ -0.37
UPF1-205ENST00000598209 WDR75Q8IWA0 830 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms