RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 ALOX5P09917 674 aa13.63□□□□□ -0.23
VRK3-212ENST00000596814 POLE2P56282 527 aa13.63□□□□□ -0.23
VRK3-212ENST00000596814 SLC37A1P57057 533 aa13.63□□□□□ -0.23
VRK3-212ENST00000596814 RPS18P62269 152 aaKnown RBP13.63□□□□□ -0.23
VRK3-212ENST00000596814 CDK6Q00534 326 aa13.63□□□□□ -0.23
VRK3-212ENST00000596814 CAMK2BQ13554 666 aa13.63□□□□□ -0.23
VRK3-212ENST00000596814 VEZF1Q14119 521 aa13.63□□□□□ -0.23
VRK3-212ENST00000596814 ZNHIT3Q15649 155 aaPredicted RBP13.63□□□□□ -0.23
VRK3-212ENST00000596814 EXOSC6Q5RKV6 272 aaKnown RBP13.63□□□□□ -0.23
VRK3-212ENST00000596814 CYP2R1Q6VVX0 501 aa13.63□□□□□ -0.23
VRK3-212ENST00000596814 SLC30A8Q8IWU4 369 aa13.63□□□□□ -0.23
VRK3-212ENST00000596814 ZNF321PQ8N8H1 164 aa13.63□□□□□ -0.23
VRK3-212ENST00000596814 SLC16A11Q8NCK7 471 aa13.63□□□□□ -0.23
VRK3-212ENST00000596814 HIPK4Q8NE63 616 aa13.63□□□□□ -0.23
VRK3-212ENST00000596814 OR1N1Q8NGS0 311 aa13.63□□□□□ -0.23
VRK3-212ENST00000596814 C16orf52Q8NHV5 167 aa13.63□□□□□ -0.23
VRK3-212ENST00000596814 WDR77Q9BQA1 342 aaPredicted RBP13.63□□□□□ -0.23
VRK3-212ENST00000596814 GPR87Q9BY21 358 aa13.63□□□□□ -0.23
VRK3-212ENST00000596814 FAM117AQ9C073 453 aa13.63□□□□□ -0.23
VRK3-212ENST00000596814 EXD2Q9NVH0 621 aa13.63□□□□□ -0.23
VRK3-212ENST00000596814 ANGPT4Q9Y264 503 aa13.63□□□□□ -0.23
VRK3-212ENST00000596814 CFL2Q9Y281 166 aa13.63□□□□□ -0.23
VRK3-212ENST00000596814 LOC101059948A0A1B0GTJ6 334 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 C5orf58C9J3I9 102 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 TERTO14746 1132 aaKnown RBP13.62□□□□□ -0.23
VRK3-212ENST00000596814 SEC24DO94855 1032 aaPredicted RBP13.62□□□□□ -0.23
VRK3-212ENST00000596814 ERFP50548 548 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 FOXC1Q12948 553 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 CCNIQ14094 377 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 RTP5Q14D33 572 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 DUSP5Q16690 384 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 ATAD3BQ5T9A4 648 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 SLC44A2Q8IWA5 706 aaPredicted RBP13.62□□□□□ -0.23
VRK3-212ENST00000596814 IL22RA1Q8N6P7 574 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 B3GNT7Q8NFL0 401 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 SLC38A5Q8WUX1 472 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 HOXB13Q92826 284 aaPredicted RBP13.62□□□□□ -0.23
VRK3-212ENST00000596814 FAM162AQ96A26 154 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 NXPE2Q96DL1 559 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 TMEM19Q96HH6 336 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 NSMCE2Q96MF7 247 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 VSTM2LQ96N03 204 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 STACQ99469 402 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 LMF2Q9BU23 707 aaKnown RBP13.62□□□□□ -0.23
VRK3-212ENST00000596814 NUDT9Q9BW91 350 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 PIGUQ9H490 435 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 DUSP22Q9NRW4 184 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 DTX4Q9Y2E6 619 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 HS3ST3B1Q9Y662 390 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 AK5Q9Y6K8 562 aa13.62□□□□□ -0.23
VRK3-212ENST00000596814 SLC28A2O43868 658 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 CREG1O75629 220 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 TFPTP0C1Z6 253 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 NR2F1P10589 423 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 MMP11P24347 488 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 MAP3K8P41279 467 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 FUT5Q11128 374 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 INTS11Q5TA45 600 aaKnown RBP13.61□□□□□ -0.23
VRK3-212ENST00000596814 C16orf62Q7Z3J2 963 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 SPATA24Q86W54 205 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 DTX1Q86Y01 620 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 SPPL2CQ8IUH8 684 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 METTL25Q8N6Q8 603 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 COX18Q8N8Q8 333 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 NFAM1Q8NET5 270 aaPredicted RBP13.61□□□□□ -0.23
VRK3-212ENST00000596814 CDS1Q92903 461 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 NKD1Q969G9 470 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 SLC35A4Q96G79 324 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 ITPAQ9BY32 194 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 GORASP2Q9H8Y8 452 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 GIN1Q9NXP7 522 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 KCND3Q9UK17 655 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 KCNE3Q9Y6H6 103 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 PRAMEF27A3QJZ7 478 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 TTC36A6NLP5 189 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 AQP12BA6NM10 295 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 OR6C76A6NM76 312 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 ENTPD5O75356 428 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 SOX30O94993 753 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 NKX2-2O95096 273 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 LIPCP11150 499 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 F8A1P23610 371 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 AQP1P29972 269 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 OTX2P32243 289 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 GNA13Q14344 377 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 SSPNQ14714 243 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 MYBPC3Q14896 1274 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 PCOLCEQ15113 449 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 SYPL1Q16563 259 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 LRRC23Q53EV4 343 aaPredicted RBP13.61□□□□□ -0.23
VRK3-212ENST00000596814 MTX3Q5HYI7 312 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 HEPHL1Q6MZM0 1159 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 REEP3Q6NUK4 255 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 AQP12AQ8IXF9 295 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 GPR151Q8TDV0 419 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 PPIEQ9UNP9 301 aaKnown RBP13.61□□□□□ -0.23
VRK3-212ENST00000596814 LIPT1Q9Y234 373 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 ZNF451Q9Y4E5 1061 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 PCDHGB3Q9Y5G1 929 aa13.61□□□□□ -0.23
VRK3-212ENST00000596814 IGHV1-45A0A0A0MS14 117 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms