RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 CLDN14O95500 239 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 HSPA4LO95757 839 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 CHRNGP07510 517 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 IL12BP29460 328 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 GPC1P35052 558 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 GCKP35557 465 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 CASP3P42574 277 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 ASMTP46597 345 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 RPL38P63173 70 aaKnown RBP15.93■□□□□ 0.14
IRF3-208ENST00000594387 ADORA2A-AS1P86434 159 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 GXYLT1Q4G148 440 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 SLC30A6Q6NXT4 461 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 ZNF585AQ6P3V2 769 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 ZCCHC23Q6ZST2 131 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 ACAD11Q709F0 780 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 CA5BP1Q8WTZ4 195 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 PPCDCQ96CD2 204 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 CCT7Q99832 543 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 SSU72Q9NP77 194 aaKnown RBP15.93■□□□□ 0.14
IRF3-208ENST00000594387 ALKBH4Q9NXW9 302 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 MRTO4Q9UKD2 239 aaKnown RBP15.93■□□□□ 0.14
IRF3-208ENST00000594387 DTX4Q9Y2E6 619 aa15.93■□□□□ 0.14
IRF3-208ENST00000594387 GPR55Q9Y2T6 319 aaPredicted RBP15.93■□□□□ 0.14
IRF3-208ENST00000594387 A0A087WV62 115 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 A0A1B0GVC2 190 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 TM9SF1O15321 606 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 TYROBPO43914 113 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 CREB1P16220 341 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 ELAVL4P26378 380 aaKnown RBP15.92■□□□□ 0.14
IRF3-208ENST00000594387 HTR1EP28566 365 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 RPL3P39023 403 aaKnown RBP15.92■□□□□ 0.14
IRF3-208ENST00000594387 ZNF155Q12901 538 aaPredicted RBP15.92■□□□□ 0.14
IRF3-208ENST00000594387 SNTA1Q13424 505 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 EFR3AQ14156 821 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 KIAA0040Q15053 153 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 ATP6AP1LQ52LC2 224 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 Q6ZSR9 355 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 R3HCC1LQ7Z5L2 792 aaKnown RBP15.92■□□□□ 0.14
IRF3-208ENST00000594387 FGD2Q7Z6J4 655 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 CHERPQ8IWX8 916 aaKnown RBP15.92■□□□□ 0.14
IRF3-208ENST00000594387 OR1J4Q8NGS1 313 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.92■□□□□ 0.147e-6■■■■□ 22
IRF3-208ENST00000594387 ASB5Q8WWX0 329 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 RND1Q92730 232 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 GFM2Q969S9 779 aaKnown RBP15.92■□□□□ 0.14
IRF3-208ENST00000594387 REEP4Q9H6H4 257 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 ZNF703Q9H7S9 590 aaPredicted RBP15.92■□□□□ 0.14
IRF3-208ENST00000594387 FOLH1BQ9HBA9 442 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 ACKR4Q9NPB9 350 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 DDX18Q9NVP1 670 aaKnown RBP15.92■□□□□ 0.14
IRF3-208ENST00000594387 SH3BP4Q9P0V3 963 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 CCL27Q9Y4X3 112 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 PTGDR2Q9Y5Y4 395 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 DOPEY1Q5JWR5 2465 aa15.92■□□□□ 0.14
IRF3-208ENST00000594387 CACNA1CQ13936 2221 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 WDR91A4D1P6 747 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 OR6C70A6NIJ9 312 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 PIP5K1BO14986 540 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 TO15178 435 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 BIRC5O15392 142 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 PDPK1O15530 556 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 HNRNPRO43390 633 aaKnown RBP15.91■□□□□ 0.14
IRF3-208ENST00000594387 AKAP10O43572 662 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 WDR1O75083 606 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 TRIM3O75382 744 aaPredicted RBP15.91■□□□□ 0.14
IRF3-208ENST00000594387 SNUPNO95149 360 aaKnown RBP15.91■□□□□ 0.14
IRF3-208ENST00000594387 ZWINTO95229 277 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 HOXD4P09016 255 aaPredicted RBP15.91■□□□□ 0.14
IRF3-208ENST00000594387 DCTP40126 519 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 SERPINB4P48594 390 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 DUSP8Q13202 625 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 SF3B4Q15427 424 aaKnown RBP eCLIP15.91■□□□□ 0.141e-9■□□□□ 10.1
IRF3-208ENST00000594387 RFTN2Q52LD8 501 aaPredicted RBP15.91■□□□□ 0.14
IRF3-208ENST00000594387 TMEM107Q6UX40 140 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 LRIG3Q6UXM1 1119 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 SLC44A2Q8IWA5 706 aaPredicted RBP15.91■□□□□ 0.14
IRF3-208ENST00000594387 KIRREL3Q8IZU9 778 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 SIMC1Q8NDZ2 872 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 OR7G2Q8NG99 324 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 OR5M9Q8NGP3 310 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 TMBIM1Q969X1 311 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 SDCCAG3Q96C92 435 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 MTERF3Q96E29 417 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 ZBED6CLQ96FA7 236 aaPredicted RBP15.91■□□□□ 0.14
IRF3-208ENST00000594387 TMEM41AQ96HV5 264 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 EGLN2Q96KS0 407 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 COL21A1Q96P44 957 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 TSSK3Q96PN8 268 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 BTBD9Q96Q07 612 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 OSBPL11Q9BXB4 747 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 TUBB1Q9H4B7 451 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 C3orf14Q9HBI5 128 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 PROK2Q9HC23 129 aa15.91■□□□□ 0.14
IRF3-208ENST00000594387 C15orf38-AP3S2A0A0A6YYH1 394 aa15.9■□□□□ 0.14
IRF3-208ENST00000594387 TTC36A6NLP5 189 aa15.9■□□□□ 0.14
IRF3-208ENST00000594387 GNB5O14775 395 aa15.9■□□□□ 0.14
IRF3-208ENST00000594387 LSM1O15116 133 aaKnown RBP15.9■□□□□ 0.14
IRF3-208ENST00000594387 CELA3AP09093 270 aa15.9■□□□□ 0.14
IRF3-208ENST00000594387 RFPL3SP0C7P2 107 aa15.9■□□□□ 0.14
IRF3-208ENST00000594387 GABRA1P14867 456 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms