RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 CPN2P22792 545 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 ERP29P30040 261 aaKnown RBP15.53■□□□□ 0.08
LIG1-206ENST00000594067 VIPR2P41587 438 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 PRMT2P55345 433 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 P2RX3P56373 397 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 CDK5Q00535 292 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 BNC1Q01954 994 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 RPA4Q13156 261 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 ARHGEF6Q15052 776 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 DDI2Q5TDH0 399 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 FAM46CQ5VWP2 391 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 ZNF793Q6ZN11 406 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 ERN2Q76MJ5 926 aaKnown RBP15.53■□□□□ 0.08
LIG1-206ENST00000594067 LRRTM4Q86VH4 590 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 LAPTM4BQ86VI4 370 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 CACUL1Q86Y37 369 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 LINC01555Q8NAE3 123 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 NLGN4YQ8NFZ3 816 aaPredicted RBP15.53■□□□□ 0.08
LIG1-206ENST00000594067 ZFAND1Q8TCF1 268 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 SLC9A6Q92581 669 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 RNFT2Q96EX2 444 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 BBS4Q96RK4 519 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 AICDAQ9GZX7 198 aa15.53■□□□□ 0.08
LIG1-206ENST00000594067 A0A0X1KG70 313 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 EDDM13A0A1B0GTR0 161 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 KIAA0355O15063 1070 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 ALAS2P22557 587 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 CLCNKAP51800 687 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 GAS1P54826 345 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 CSNK1G2P78368 415 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 C19orf57Q0VDD7 668 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 FUT5Q11128 374 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 MAP4K2Q12851 820 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 LASP1Q14847 261 aaKnown RBP15.52■□□□□ 0.08
LIG1-206ENST00000594067 ARHGAP19Q14CB8 494 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 QPRTQ15274 297 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 TMEM52BQ4KMG9 183 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 ZNF628Q5EBL2 1059 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 C1orf94Q6P1W5 598 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 CD300LDQ6UXZ3 194 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 ATP6V1C2Q8NEY4 427 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 COX14Q96I36 57 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 TM9SF2Q99805 663 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 KLHL31Q9H511 634 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 XKR8Q9H6D3 395 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 DDX31Q9H8H2 851 aaKnown RBP15.52■□□□□ 0.08
LIG1-206ENST00000594067 SLC35C2Q9NQQ7 365 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 ZSCAN32Q9NX65 697 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 NDRG2Q9UN36 371 aaKnown RBP15.52■□□□□ 0.08
LIG1-206ENST00000594067 GPSM3Q9Y4H4 160 aa15.52■□□□□ 0.08
LIG1-206ENST00000594067 KIF26AQ9ULI4 1882 aaPredicted RBP15.52■□□□□ 0.08
LIG1-206ENST00000594067 FRS3O43559 492 aa15.52■□□□□ 0.07
LIG1-206ENST00000594067 ZNF780AO75290 641 aaPredicted RBP15.52■□□□□ 0.07
LIG1-206ENST00000594067 CCNYL3P0C7X3 344 aa15.52■□□□□ 0.07
LIG1-206ENST00000594067 HTR2BP41595 481 aa15.52■□□□□ 0.07
LIG1-206ENST00000594067 CAV3P56539 151 aa15.52■□□□□ 0.07
LIG1-206ENST00000594067 WNT4P56705 351 aa15.52■□□□□ 0.07
LIG1-206ENST00000594067 ELAVL3Q14576 367 aaKnown RBP15.52■□□□□ 0.07
LIG1-206ENST00000594067 TATDN3Q17R31 274 aa15.52■□□□□ 0.07
LIG1-206ENST00000594067 SYCE2Q6PIF2 218 aa15.52■□□□□ 0.07
LIG1-206ENST00000594067 PEX5LQ8IYB4 626 aa15.52■□□□□ 0.07
LIG1-206ENST00000594067 ZFP41Q8N8Y5 198 aa15.52■□□□□ 0.07
LIG1-206ENST00000594067 ENKURQ8TC29 256 aa15.52■□□□□ 0.07
LIG1-206ENST00000594067 FGF11Q92914 225 aa15.52■□□□□ 0.07
LIG1-206ENST00000594067 KIAA1143Q96AT1 154 aaPredicted RBP15.52■□□□□ 0.07
LIG1-206ENST00000594067 PRRC1Q96M27 445 aa15.52■□□□□ 0.07
LIG1-206ENST00000594067 KATNB1Q9BVA0 655 aa15.52■□□□□ 0.07
LIG1-206ENST00000594067 KLHL21Q9UJP4 597 aa15.52■□□□□ 0.07
LIG1-206ENST00000594067 KCNE3Q9Y6H6 103 aa15.52■□□□□ 0.07
LIG1-206ENST00000594067 COL4A3Q01955 1670 aa15.52■□□□□ 0.07
LIG1-206ENST00000594067 A0A0A6YYD5 115 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 OTOL1A6NHN0 477 aaPredicted RBP15.51■□□□□ 0.07
LIG1-206ENST00000594067 RFXAPO00287 272 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 RPN2P04844 631 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 NR2F6P10588 404 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 APEX1P27695 318 aaKnown RBP15.51■□□□□ 0.07
LIG1-206ENST00000594067 CD79BP40259 229 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 GZMKP49863 264 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 SMSP52788 366 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 EFNB1P98172 346 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 MLLT1Q03111 559 aaPredicted RBP15.51■□□□□ 0.07
LIG1-206ENST00000594067 COL9A2Q14055 689 aaPredicted RBP15.51■□□□□ 0.07
LIG1-206ENST00000594067 NDUFA9Q16795 377 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 CRTC2Q53ET0 693 aaPredicted RBP15.51■□□□□ 0.07
LIG1-206ENST00000594067 METRNLQ641Q3 311 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 GLCCI1Q86VQ1 547 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 C16orf58Q96GQ5 468 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 SAP130Q9H0E3 1048 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 SLC27A6Q9Y2P4 619 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 ADH1CP00326 375 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 FGBP02675 491 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 C8orf89P0DMQ9 161 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 P2RY2P41231 377 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 MAN2A2P49641 1150 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 KHKP50053 298 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 DUSP2Q05923 314 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 ZNF234Q14588 700 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 MLC1Q15049 377 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 KLHL22Q53GT1 634 aa15.51■□□□□ 0.07
LIG1-206ENST00000594067 C3orf38Q5JPI3 329 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms