RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 PRAMEF25A6NGN4 478 aa21.77■■□□□ 1.08
LSM4-202ENST00000593564 PPP6CO00743 305 aa21.77■■□□□ 1.08
LSM4-202ENST00000593564 TO15178 435 aa21.77■■□□□ 1.08
LSM4-202ENST00000593564 CBR3O75828 277 aa21.77■■□□□ 1.08
LSM4-202ENST00000593564 GOSR1O95249 250 aa21.77■■□□□ 1.08
LSM4-202ENST00000593564 TMIGD3P0DMS9 266 aaPredicted RBP21.77■■□□□ 1.08
LSM4-202ENST00000593564 CNTFP26441 200 aa21.77■■□□□ 1.08
LSM4-202ENST00000593564 EMDP50402 254 aa21.77■■□□□ 1.08
LSM4-202ENST00000593564 FOXD4Q12950 439 aaPredicted RBP21.77■■□□□ 1.08
LSM4-202ENST00000593564 TRMT12Q53H54 448 aaKnown RBP21.77■■□□□ 1.08
LSM4-202ENST00000593564 WDSUB1Q8N9V3 476 aa21.77■■□□□ 1.08
LSM4-202ENST00000593564 LINC01560Q8TB33 94 aa21.77■■□□□ 1.08
LSM4-202ENST00000593564 ZNF681Q96N22 645 aa21.77■■□□□ 1.08
LSM4-202ENST00000593564 ZFP3Q96NJ6 502 aa21.77■■□□□ 1.08
LSM4-202ENST00000593564 TUBA1CQ9BQE3 449 aa21.77■■□□□ 1.08
LSM4-202ENST00000593564 CDC42EP4Q9H3Q1 356 aaKnown RBP21.77■■□□□ 1.08
LSM4-202ENST00000593564 EHD3Q9NZN3 535 aa21.77■■□□□ 1.08
LSM4-202ENST00000593564 TRPS1Q9UHF7 1281 aa21.77■■□□□ 1.08
LSM4-202ENST00000593564 MAPRE3Q9UPY8 281 aa21.77■■□□□ 1.08
LSM4-202ENST00000593564 ZNF780BQ9Y6R6 833 aa21.77■■□□□ 1.08
LSM4-202ENST00000593564 FLNAP21333 2647 aaKnown RBP21.77■■□□□ 1.08
LSM4-202ENST00000593564 NAV3Q8IVL0 2385 aa21.76■■□□□ 1.07
LSM4-202ENST00000593564 C2orf72A6NCS6 295 aa21.76■■□□□ 1.07
LSM4-202ENST00000593564 FRG2CA6NGY1 282 aa21.76■■□□□ 1.07
LSM4-202ENST00000593564 RAF1P04049 648 aa21.76■■□□□ 1.07
LSM4-202ENST00000593564 PCSK2P16519 638 aa21.76■■□□□ 1.07
LSM4-202ENST00000593564 SLCO1A2P46721 670 aa21.76■■□□□ 1.07
LSM4-202ENST00000593564 CDH13P55290 713 aa21.76■■□□□ 1.07
LSM4-202ENST00000593564 LTB4RQ15722 352 aa21.76■■□□□ 1.07
LSM4-202ENST00000593564 FBXW10Q5XX13 1052 aa21.76■■□□□ 1.07
LSM4-202ENST00000593564 ENPP6Q6UWR7 440 aa21.76■■□□□ 1.07
LSM4-202ENST00000593564 ADGRE4PQ86SQ3 457 aa21.76■■□□□ 1.07
LSM4-202ENST00000593564 C1orf52Q8N6N3 182 aaKnown RBP21.76■■□□□ 1.07
LSM4-202ENST00000593564 OR14L1PQ8NHC6 308 aa21.76■■□□□ 1.07
LSM4-202ENST00000593564 SFXN3Q9BWM7 321 aa21.76■■□□□ 1.07
LSM4-202ENST00000593564 TSPYL1Q9H0U9 437 aa21.76■■□□□ 1.07
LSM4-202ENST00000593564 DLL4Q9NR61 685 aa21.76■■□□□ 1.07
LSM4-202ENST00000593564 ZNF225Q9UK10 706 aa21.76■■□□□ 1.07
LSM4-202ENST00000593564 OR6C70A6NIJ9 312 aa21.75■■□□□ 1.07
LSM4-202ENST00000593564 A8MT66 165 aa21.75■■□□□ 1.07
LSM4-202ENST00000593564 H0Y3Z8 333 aa21.75■■□□□ 1.07
LSM4-202ENST00000593564 ERN1O75460 977 aaKnown RBP21.75■■□□□ 1.07
LSM4-202ENST00000593564 SBK3P0C264 359 aa21.75■■□□□ 1.07
LSM4-202ENST00000593564 TSPAN8P19075 237 aa21.75■■□□□ 1.07
LSM4-202ENST00000593564 ALDH9A1P49189 494 aa21.75■■□□□ 1.07
LSM4-202ENST00000593564 TMEM151AQ8N4L1 468 aa21.75■■□□□ 1.07
LSM4-202ENST00000593564 ZNF675Q8TD23 568 aa21.75■■□□□ 1.07
LSM4-202ENST00000593564 TMCO6Q96DC7 493 aa21.75■■□□□ 1.07
LSM4-202ENST00000593564 UCN2Q96RP3 112 aa21.75■■□□□ 1.07
LSM4-202ENST00000593564 TM9SF2Q99805 663 aa21.75■■□□□ 1.07
LSM4-202ENST00000593564 VPS29Q9UBQ0 182 aa21.75■■□□□ 1.07
LSM4-202ENST00000593564 ZNF180Q9UJW8 692 aa21.75■■□□□ 1.07
LSM4-202ENST00000593564 GPR55Q9Y2T6 319 aaPredicted RBP21.75■■□□□ 1.07
LSM4-202ENST00000593564 ABCB7O75027 752 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 RCBTB2O95199 551 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 ATE1O95260 518 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 HSD3B1P14060 373 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 HSD3B2P26439 372 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 GFRA1P56159 465 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 MRPS35P82673 323 aaKnown RBP21.74■■□□□ 1.07
LSM4-202ENST00000593564 HMGCS1Q01581 520 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 FOXF2Q12947 444 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 ZNF628Q5EBL2 1059 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 FAM180BQ6P0A1 224 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 PLCZ1Q86YW0 608 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 DCAKDQ8WVC6 231 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 WNT2BQ93097 391 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 TMBIM1Q969X1 311 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 ERP27Q96DN0 273 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 SLC35A4Q96G79 324 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 COL21A1Q96P44 957 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 BTBD9Q96Q07 612 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 HBEGFQ99075 208 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 RBM24Q9BX46 236 aaKnown RBP21.74■■□□□ 1.07
LSM4-202ENST00000593564 PLEKHF2Q9H8W4 249 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 HEY2Q9UBP5 337 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 MCM8Q9UJA3 840 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 UTS2RQ9UKP6 389 aa21.74■■□□□ 1.07
LSM4-202ENST00000593564 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.74■■□□□ 1.07
LSM4-202ENST00000593564 VPS13CQ709C8 3753 aa21.73■■□□□ 1.07
LSM4-202ENST00000593564 CLCA1A8K7I4 914 aa21.73■■□□□ 1.07
LSM4-202ENST00000593564 TRIM49D1C9J1S8 452 aa21.73■■□□□ 1.07
LSM4-202ENST00000593564 BCAS2O75934 225 aaPredicted RBP21.73■■□□□ 1.07
LSM4-202ENST00000593564 OR4F21O95013 312 aa21.73■■□□□ 1.07
LSM4-202ENST00000593564 FOSL1P15407 271 aa21.73■■□□□ 1.07
LSM4-202ENST00000593564 HSD17B3P37058 310 aa21.73■■□□□ 1.07
LSM4-202ENST00000593564 ADAM8P78325 824 aa21.73■■□□□ 1.07
LSM4-202ENST00000593564 CLCQ05315 142 aa21.73■■□□□ 1.07
LSM4-202ENST00000593564 FAM219BQ5XKK7 198 aa21.73■■□□□ 1.07
LSM4-202ENST00000593564 IFNEQ86WN2 208 aa21.73■■□□□ 1.07
LSM4-202ENST00000593564 TRIM42Q8IWZ5 723 aa21.73■■□□□ 1.07
LSM4-202ENST00000593564 DACH2Q96NX9 599 aa21.73■■□□□ 1.07
LSM4-202ENST00000593564 YIPF4Q9BSR8 244 aa21.73■■□□□ 1.07
LSM4-202ENST00000593564 TAS2R10Q9NYW0 307 aa21.73■■□□□ 1.07
LSM4-202ENST00000593564 CLCF1Q9UBD9 225 aa21.73■■□□□ 1.07
LSM4-202ENST00000593564 WIF1Q9Y5W5 379 aa21.73■■□□□ 1.07
LSM4-202ENST00000593564 MANBAO00462 879 aa21.72■■□□□ 1.07
LSM4-202ENST00000593564 ESRRBO95718 433 aa21.72■■□□□ 1.07
LSM4-202ENST00000593564 HOXB4P17483 251 aaPredicted RBP21.72■■□□□ 1.07
LSM4-202ENST00000593564 SRD5A2P31213 254 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms