RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 AP4B1Q9Y6B7 739 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 EVC2Q86UK5 1308 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 RAB3GAP2Q9H2M9 1393 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 LAMB2P55268 1798 aa4.34□□□□□ -1.71
SMAD4-216ENST00000593223 ZNF646O15015 1829 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-216ENST00000593223 ACACBO00763 2458 aa4.34□□□□□ -1.72
SMAD4-216ENST00000593223 ZSWIM8A7E2V4 1837 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 SSC5DA1L4H1 1573 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 NCAPD2Q15021 1401 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 IGHV4-4A0A075B6R2 117 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 TTC26A0AVF1 554 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 C5orf52A6NGY3 159 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 NR5A2O00482 541 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 TRDMT1O14717 391 aaKnown RBP4.33□□□□□ -1.72
SMAD4-216ENST00000593223 TTI1O43156 1089 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 PPIP5K2O43314 1243 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 B4GALT2O60909 372 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 CRCPO75575 148 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 TOM1L1O75674 476 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 KLHL2O95198 593 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 ECDO95905 644 aaPredicted RBP4.33□□□□□ -1.72
SMAD4-216ENST00000593223 LGI1O95970 557 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 ASNSP08243 561 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 PRPS2P11908 318 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 F3P13726 295 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 POU2F1P14859 743 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 TCF4P15884 667 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 CD1BP29016 333 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 CDC25CP30307 473 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 HTR2BP41595 481 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 MAGEA11P43364 429 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 KCNJ1P48048 391 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 SMSP52788 366 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 B3GALT5-AS1P59052 145 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 HERV-K104P61576 105 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 HNRNPKP61978 463 aaKnown RBP eCLIP4.33□□□□□ -1.72
SMAD4-216ENST00000593223 ZNF415Q09FC8 603 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 MAB21L1Q13394 359 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 PDK3Q15120 406 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 CDO1Q16878 200 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 KLHL40Q2TBA0 621 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 ZFP69Q49AA0 526 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 C20orf194Q5TEA3 1177 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 PMF1Q6P1K2 205 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 ZBTB49Q6ZSB9 765 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 DET1Q7L5Y6 550 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 EFL1Q7Z2Z2 1120 aaKnown RBP4.33□□□□□ -1.72
SMAD4-216ENST00000593223 PRSS42Q7Z5A4 293 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 NUDT13Q86X67 352 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 CSGALNACT2Q8N6G5 542 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 RASGEF1AQ8N9B8 481 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 ZNF565Q8N9K5 539 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 OR4C3Q8NH37 302 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 NCOA7Q8NI08 942 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 HPSE2Q8WWQ2 592 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 RLN3Q8WXF3 142 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 AZIN2Q96A70 460 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 LLPHQ9BRT6 129 aaKnown RBP4.33□□□□□ -1.72
SMAD4-216ENST00000593223 OSBPL10Q9BXB5 764 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 DDX47Q9H0S4 455 aaKnown RBP4.33□□□□□ -1.72
SMAD4-216ENST00000593223 WDR13Q9H1Z4 485 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 RPF1Q9H9Y2 349 aaKnown RBP4.33□□□□□ -1.72
SMAD4-216ENST00000593223 FGF22Q9HCT0 170 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 Q9N2K0 584 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 MYNNQ9NPC7 610 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 IL26Q9NPH9 171 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 ZNF71Q9NQZ8 489 aaPredicted RBP4.33□□□□□ -1.72
SMAD4-216ENST00000593223 PANK4Q9NVE7 773 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 ETNK2Q9NVF9 386 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 C2orf42Q9NWW7 574 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 HYPKQ9NX55 129 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 ATPIF1Q9UII2 106 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 HBS1LQ9Y450 684 aaKnown RBP4.33□□□□□ -1.72
SMAD4-216ENST00000593223 ASH1LQ9NR48 2969 aaKnown RBP4.33□□□□□ -1.72
SMAD4-216ENST00000593223 GCN1Q92616 2671 aaKnown RBP4.33□□□□□ -1.72
SMAD4-216ENST00000593223 PTPRZ1P23471 2315 aaPredicted RBP4.33□□□□□ -1.72
SMAD4-216ENST00000593223 DNAH14Q0VDD8 3507 aa4.33□□□□□ -1.72
SMAD4-216ENST00000593223 NAV2Q8IVL1 2488 aa4.32□□□□□ -1.72
SMAD4-216ENST00000593223 KTN1Q86UP2 1357 aaKnown RBP4.32□□□□□ -1.72
SMAD4-216ENST00000593223 CDHR2Q9BYE9 1310 aa4.32□□□□□ -1.72
SMAD4-216ENST00000593223 A0A087WW49 117 aa4.32□□□□□ -1.72
SMAD4-216ENST00000593223 NEMP2A6NFY4 417 aa4.32□□□□□ -1.72
SMAD4-216ENST00000593223 TRIM77I1YAP6 450 aa4.32□□□□□ -1.72
SMAD4-216ENST00000593223 K7EQM0 130 aa4.32□□□□□ -1.72
SMAD4-216ENST00000593223 KLF11O14901 512 aa4.32□□□□□ -1.72
SMAD4-216ENST00000593223 CGAP01215 116 aa4.32□□□□□ -1.72
SMAD4-216ENST00000593223 IGHEP01854 428 aa4.32□□□□□ -1.72
SMAD4-216ENST00000593223 CXCL10P02778 98 aa4.32□□□□□ -1.72
SMAD4-216ENST00000593223 PGK2P07205 417 aa4.32□□□□□ -1.72
SMAD4-216ENST00000593223 RAB40ALP0C0E4 278 aa4.32□□□□□ -1.72
SMAD4-216ENST00000593223 CYP11B2P19099 503 aa4.32□□□□□ -1.72
SMAD4-216ENST00000593223 MPZP25189 248 aa4.32□□□□□ -1.72
SMAD4-216ENST00000593223 ANXA13P27216 316 aa4.32□□□□□ -1.72
SMAD4-216ENST00000593223 PKLRP30613 574 aa4.32□□□□□ -1.72
SMAD4-216ENST00000593223 CCNHP51946 323 aaPredicted RBP4.32□□□□□ -1.72
SMAD4-216ENST00000593223 MZT1Q08AG7 82 aa4.32□□□□□ -1.72
SMAD4-216ENST00000593223 ASPHQ12797 758 aa4.32□□□□□ -1.72
SMAD4-216ENST00000593223 CYLC2Q14093 348 aaPredicted RBP4.32□□□□□ -1.72
SMAD4-216ENST00000593223 TMEM187Q14656 261 aa4.32□□□□□ -1.72
SMAD4-216ENST00000593223 PTPRCAPQ14761 206 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms