RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 ADORA3P0DMS8 318 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 TLX1P31314 330 aaPredicted RBP18.46■□□□□ 0.55
CLIP3-206ENST00000593074 LIPAP38571 399 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 SLC15A1P46059 708 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 BLKP51451 505 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 XKP51811 444 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 VBP1P61758 197 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 ALDH6A1Q02252 535 aaKnown RBP18.46■□□□□ 0.55
CLIP3-206ENST00000593074 CHRNEQ04844 493 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 GAS6Q14393 721 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 TMEM201Q5SNT2 666 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 ATAD3BQ5T9A4 648 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 LINC00299Q6ZSB3 139 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 FAM160A2Q8N612 972 aaPredicted RBP18.46■□□□□ 0.55
CLIP3-206ENST00000593074 MORN4Q8NDC4 146 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 FAM174AQ8TBP5 190 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 SLC37A2Q8TED4 501 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 ARHGDIGQ99819 225 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 KLHL25Q9H0H3 589 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 LYRM4Q9HD34 91 aa18.46■□□□□ 0.55
CLIP3-206ENST00000593074 SCN3AQ9NY46 2000 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 IGHV1OR15-9A0A0B4J2B8 117 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 DUXAA6NLW8 204 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 H0YGG7 62 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 ZSCAN9O15535 394 aaPredicted RBP18.45■□□□□ 0.54
CLIP3-206ENST00000593074 ALPPP05187 535 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 PIPP12273 146 aaPredicted RBP18.45■□□□□ 0.54
CLIP3-206ENST00000593074 ALOX12P18054 663 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 ARF3P61204 181 aaPredicted RBP18.45■□□□□ 0.54
CLIP3-206ENST00000593074 COX10Q12887 443 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 C1orf61Q13536 156 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 NDUFA9Q16795 377 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 TIGD6Q17RP2 521 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 FAM214AQ32MH5 1076 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 ZNF311Q5JNZ3 666 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 CDC73Q6P1J9 531 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 USP53Q70EK8 1073 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 C16orf62Q7Z3J2 963 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 OR4K5Q8NGD3 323 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 FNDC8Q8TC99 324 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 DYNC2LI1Q8TCX1 351 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 RERGQ96A58 199 aaPredicted RBP18.45■□□□□ 0.54
CLIP3-206ENST00000593074 CDCA4Q9BXL8 241 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 PALMDQ9NP74 551 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 DNAAF2Q9NVR5 837 aaKnown RBP18.45■□□□□ 0.54
CLIP3-206ENST00000593074 HRASLS2Q9NWW9 162 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 MRPS17Q9Y2R5 130 aaKnown RBP18.45■□□□□ 0.54
CLIP3-206ENST00000593074 A0A0J9YY10 115 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 DNAJB6O75190 326 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 ZIC2O95409 532 aaPredicted RBP18.45■□□□□ 0.54
CLIP3-206ENST00000593074 IGFBP1P08833 259 aaPredicted RBP18.45■□□□□ 0.54
CLIP3-206ENST00000593074 ALDH4A1P30038 563 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 SIM1P81133 766 aaPredicted RBP18.45■□□□□ 0.54
CLIP3-206ENST00000593074 UBXN2BQ14CS0 331 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 SFTPA2Q8IWL1 248 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 C9orf43Q8TAL5 461 aaPredicted RBP18.45■□□□□ 0.54
CLIP3-206ENST00000593074 ZNF675Q8TD23 568 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 TRUB1Q8WWH5 349 aaKnown RBP18.45■□□□□ 0.54
CLIP3-206ENST00000593074 NR4A3Q92570 626 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 SLC35A4Q96G79 324 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 SLC6A18Q96N87 628 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 ORAI3Q9BRQ5 295 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 SLC25A19Q9HC21 320 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 TMEM74BQ9NUR3 256 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 TBC1D23Q9NUY8 699 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 PTGFRNQ9P2B2 879 aa18.45■□□□□ 0.54
CLIP3-206ENST00000593074 MRPS2Q9Y399 296 aaKnown RBP18.45■□□□□ 0.54
CLIP3-206ENST00000593074 M0R3G1 203 aa18.44■□□□□ 0.54
CLIP3-206ENST00000593074 AGR2O95994 175 aa18.44■□□□□ 0.54
CLIP3-206ENST00000593074 PVRP15151 417 aa18.44■□□□□ 0.54
CLIP3-206ENST00000593074 MMP11P24347 488 aa18.44■□□□□ 0.54
CLIP3-206ENST00000593074 C21orf59P57076 290 aa18.44■□□□□ 0.54
CLIP3-206ENST00000593074 NCS1P62166 190 aa18.44■□□□□ 0.54
CLIP3-206ENST00000593074 LSM3P62310 102 aaKnown RBP18.44■□□□□ 0.54
CLIP3-206ENST00000593074 ANKDD1AQ495B1 522 aa18.44■□□□□ 0.54
CLIP3-206ENST00000593074 C6orf132Q5T0Z8 1188 aa18.44■□□□□ 0.54
CLIP3-206ENST00000593074 C1orf94Q6P1W5 598 aa18.44■□□□□ 0.54
CLIP3-206ENST00000593074 SLCO6A1Q86UG4 719 aa18.44■□□□□ 0.54
CLIP3-206ENST00000593074 PARGQ86W56 976 aa18.44■□□□□ 0.54
CLIP3-206ENST00000593074 SLC15A4Q8N697 577 aa18.44■□□□□ 0.54
CLIP3-206ENST00000593074 ADAMTS15Q8TE58 950 aa18.44■□□□□ 0.54
CLIP3-206ENST00000593074 RPL3LQ92901 407 aaKnown RBP18.44■□□□□ 0.54
CLIP3-206ENST00000593074 HLA-CQ95604 372 aa18.44■□□□□ 0.54
CLIP3-206ENST00000593074 HSPBAP1Q96EW2 488 aa18.44■□□□□ 0.54
CLIP3-206ENST00000593074 VMP1Q96GC9 406 aa18.44■□□□□ 0.54
CLIP3-206ENST00000593074 CRELD1Q96HD1 420 aa18.44■□□□□ 0.54
CLIP3-206ENST00000593074 CHST2Q9Y4C5 530 aa18.44■□□□□ 0.54
CLIP3-206ENST00000593074 H3BN98 237 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 TPST2O60704 377 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 PTHP01270 115 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 CPMP14384 443 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 PRKAR1BP31321 381 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 SOX18P35713 384 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 PDX1P52945 283 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 SYT16Q17RD7 645 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 INAVAQ3KP66 663 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 MANEAQ5SRI9 462 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 ZER1Q7Z7L7 766 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 VRK2Q86Y07 508 aa18.43■□□□□ 0.54
CLIP3-206ENST00000593074 GJD3Q8N144 294 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms