RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 ABCD3P28288 659 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 MAP3K8P41279 467 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 CCT3P49368 545 aaKnown RBP9.17□□□□□ -0.94
TPM4-216ENST00000592822 PRKAG1P54619 331 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 DCAF7P61962 342 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 IRX1P78414 480 aaPredicted RBP9.17□□□□□ -0.94
TPM4-216ENST00000592822 PSG6Q00889 435 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 ZNF155Q12901 538 aaPredicted RBP9.17□□□□□ -0.94
TPM4-216ENST00000592822 RCAN2Q14206 197 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 AGKQ53H12 422 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 EXOSC6Q5RKV6 272 aaKnown RBP9.17□□□□□ -0.94
TPM4-216ENST00000592822 MFSD12Q6NUT3 480 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 BLOC1S3Q6QNY0 202 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 IL20RBQ6UXL0 311 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 SZRD1Q7Z422 152 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 MDGA2Q7Z553 956 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 GPALPP1Q8IXQ4 340 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 PRR22Q8IZ63 422 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 TAGAPQ8N103 731 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 CYP4Z2PQ8N1L4 340 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 CLEC4FQ8N1N0 589 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 VPS37AQ8NEZ2 397 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 OR4A15Q8NGL6 344 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 SFXN5Q8TD22 340 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 C10orf82Q8WW14 230 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 HOXB13Q92826 284 aaPredicted RBP9.17□□□□□ -0.94
TPM4-216ENST00000592822 VPS33AQ96AX1 596 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 SCMH1Q96GD3 660 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 C16orf58Q96GQ5 468 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 MS4A4EQ96PG1 132 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 ELAC2Q9BQ52 826 aaKnown RBP9.17□□□□□ -0.94
TPM4-216ENST00000592822 INPP5KQ9BT40 448 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 LMF2Q9BU23 707 aaKnown RBP9.17□□□□□ -0.94
TPM4-216ENST00000592822 HES7Q9BYE0 225 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 NEUROD4Q9HD90 331 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 SLC52A3Q9NQ40 469 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 EQTNQ9NQ60 294 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 SERHLQ9NQF3 203 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 KLHL1Q9NR64 748 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 ZCCHC3Q9NUD5 404 aaKnown RBP9.17□□□□□ -0.94
TPM4-216ENST00000592822 TMEM45AQ9NWC5 275 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 HPF1Q9NWY4 346 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 MAP10Q9P2G4 905 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 ANAPC2Q9UJX6 822 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 PCDHGA10Q9Y5H3 936 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 NPFFR2Q9Y5X5 522 aa9.17□□□□□ -0.94
TPM4-216ENST00000592822 SMG1Q96Q15 3661 aaKnown RBP9.17□□□□□ -0.94
TPM4-216ENST00000592822 ASPDHA6ND91 283 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 CCDC154A6NI56 674 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 NR5A2O00482 541 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 ACOX3O15254 700 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 SLC25A12O75746 678 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 C1QCP02747 245 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 HMGN2P05204 90 aaKnown RBP9.16□□□□□ -0.94
TPM4-216ENST00000592822 ACP2P11117 423 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 CD46P15529 392 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 SOAT1P35610 550 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 CDKN2CP42773 168 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 NRG3P56975 720 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 FBXW4P57775 412 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 PRR5P85299 388 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 GAB1Q13480 694 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 SPDYE7PQ495Y7 208 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 TIGD2Q4W5G0 525 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 ZNF766Q5HY98 468 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 SLC25A25Q6KCM7 469 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 RTL4Q6ZR62 310 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 MSANTD1Q6ZTZ1 278 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 SPATA21Q7Z572 469 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 SLC44A2Q8IWA5 706 aaPredicted RBP9.16□□□□□ -0.94
TPM4-216ENST00000592822 CPSF7Q8N684 471 aaKnown RBP9.16□□□□□ -0.94
TPM4-216ENST00000592822 HORMAD2Q8N7B1 307 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 SLC16A11Q8NCK7 471 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 OR4N2Q8NGD1 307 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 OR56A1Q8NGH5 318 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 OR5AK3PQ8NH89 298 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 GOT1L1Q8NHS2 421 aaPredicted RBP9.16□□□□□ -0.94
TPM4-216ENST00000592822 FBXO30Q8TB52 745 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 TMBIM1Q969X1 311 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 MOAP1Q96BY2 351 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 SPACA9Q96E40 222 aaPredicted RBP9.16□□□□□ -0.94
TPM4-216ENST00000592822 OMA1Q96E52 524 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 HSPBAP1Q96EW2 488 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 OTUB1Q96FW1 271 aaPredicted RBP9.16□□□□□ -0.94
TPM4-216ENST00000592822 C5orf34Q96MH7 638 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 YIPF4Q9BSR8 244 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 SH2D2AQ9NP31 389 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 SAR1AQ9NR31 198 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 SLC6A13Q9NSD5 602 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 RYDENQ9NUL5 291 aaKnown RBP9.16□□□□□ -0.94
TPM4-216ENST00000592822 GPATCH2Q9NW75 528 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 CCDC167Q9P0B6 97 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 PCDHGB4Q9UN71 923 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 PCDHGB6Q9Y5F9 930 aa9.16□□□□□ -0.94
TPM4-216ENST00000592822 RNF103-CHMP3A0A140T963 221 aa9.15□□□□□ -0.94
TPM4-216ENST00000592822 GXYLT2A0PJZ3 443 aa9.15□□□□□ -0.94
TPM4-216ENST00000592822 CAPN14A8MX76 684 aa9.15□□□□□ -0.94
TPM4-216ENST00000592822 B8ZZF3 427 aa9.15□□□□□ -0.94
TPM4-216ENST00000592822 SUV39H1O43463 412 aa9.15□□□□□ -0.94
TPM4-216ENST00000592822 NME2P1O60361 137 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms