RNA–Protein interactions for RNA: ENST00000592546.5

RFX2-222, Transcript of regulatory factor X2, human

APPRIS ALT1 TSL 2 BASIC

Gene RFX2, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-222	ENST00000592546	ZSWIM3	Q96MP5	696 aa		13.64	□□□□□ -0.23
RFX2-222	ENST00000592546	TEFM	Q96QE5	360 aa	Known RBP	13.64	□□□□□ -0.23
RFX2-222	ENST00000592546	FUZ	Q9BT04	418 aa		13.64	□□□□□ -0.23
RFX2-222	ENST00000592546	ZDHHC6	Q9H6R6	413 aa		13.64	□□□□□ -0.23
RFX2-222	ENST00000592546	NUDT15	Q9NV35	164 aa		13.64	□□□□□ -0.23
RFX2-222	ENST00000592546	EXTL2	Q9UBQ6	330 aa		13.64	□□□□□ -0.23
RFX2-222	ENST00000592546	TRAV6	A0A075B6T7	132 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	FURIN	P09958	794 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	GIPR	P48546	466 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	CCT3	P49368	545 aa	Known RBP	13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	ZNF81	P51508	661 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	DSTN	P60981	165 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	SNRPD1	P62314	119 aa	Known RBP	13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	DEFB103A	P81534	67 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	ZNF763	Q0D2J5	394 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	PDE7A	Q13946	482 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	GINS1	Q14691	196 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	ARSK	Q6UWY0	536 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	LUZP2	Q86TE4	346 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	CHST14	Q8NCH0	376 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	MRPS31	Q92665	395 aa	Known RBP	13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	RBPMS	Q93062	196 aa	Known RBP	13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	ECHDC3	Q96DC8	303 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	LMLN	Q96KR4	655 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	ZNF578	Q96N58	590 aa	Predicted RBP	13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	GABRP	O00591	440 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	TGM5	O43548	720 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	MTRF1	O75570	445 aa	Known RBP	13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	SERPINI2	O75830	405 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	CFD	P00746	253 aa	Predicted RBP	13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	SRPRA	P08240	638 aa	Known RBP	13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	SSTR2	P30874	369 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	RPS13	P62277	151 aa	Known RBP	13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	CAMK2D	Q13557	499 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	TMEM81	Q6P7N7	255 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	OTOP2	Q7RTS6	562 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	CLP1	Q92989	425 aa	Known RBP	13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	RFT1	Q96AA3	541 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	RNFT2	Q96EX2	444 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	KLHL15	Q96M94	604 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	THAP7	Q9BT49	309 aa	Predicted RBP	13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	SLC46A2	Q9BY10	475 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	OR51J1	Q9H342	316 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	BRD9	Q9H8M2	597 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	CCL26	Q9Y258	94 aa		13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.63	□□□□□ -0.23
RFX2-222	ENST00000592546	IGLV3-16	A0A075B6K0	115 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	LEFTY2	O00292	366 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	KHNYN	O15037	678 aa	Known RBP	13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	PRODH	O43272	600 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	HLA-DPB1	P04440	258 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	SOAT1	P35610	550 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	MAP2K6	P52564	334 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	GBX2	P52951	348 aa	Predicted RBP	13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	PUDP	Q08623	228 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	INSL4	Q14641	139 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	MPP7	Q5T2T1	576 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	C22orf39	Q6P5X5	142 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	RTL4	Q6ZR62	310 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	TMEM25	Q86YD3	366 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	RBM45	Q8IUH3	476 aa	Known RBP	13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	CPXM2	Q8N436	756 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	CEP76	Q8TAP6	659 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	SCAMP4	Q969E2	229 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	PPCDC	Q96CD2	204 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	ZNF689	Q96CS4	500 aa	Predicted RBP	13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	CHFR	Q96EP1	664 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	PDXP	Q96GD0	296 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	OR2M2	Q96R28	347 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	OR4K3	Q96R72	315 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	TMED9	Q9BVK6	235 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	SPG21	Q9NZD8	308 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	KCMF1	Q9P0J7	381 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	FAM8A1	Q9UBU6	413 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	B4GALT6	Q9UBX8	382 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	TBX21	Q9UL17	535 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	IRGM	A1A4Y4	181 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	GBA	P04062	536 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	CDK5	Q00535	292 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	NTRK2	Q16620	822 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	SPDYE7P	Q495Y7	208 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	DEF8	Q6ZN54	512 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	BMPER	Q8N8U9	685 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	OR4D11	Q8NGI4	311 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	HSD17B8	Q92506	261 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	OTUB1	Q96FW1	271 aa	Predicted RBP	13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	WBP1	Q96G27	269 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	C11orf49	Q9H6J7	331 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	MVB12B	Q9H7P6	319 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	ERVMER34-1	Q9H9K5	563 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	TBC1D17	Q9HA65	648 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	PRM3	Q9NNZ6	103 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	CYSLTR2	Q9NS75	346 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	FBXW2	Q9UKT8	454 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	ACAD8	Q9UKU7	415 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	CACNG2	Q9Y698	323 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	OBSL1	O75147	1896 aa		13.62	□□□□□ -0.23
RFX2-222	ENST00000592546	TOR1A	O14656	332 aa		13.61	□□□□□ -0.23
RFX2-222	ENST00000592546	KPNA5	O15131	536 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms