RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 PLSCR2Q9NRY7 297 aa11.09□□□□□ -0.63
TPM4-212ENST00000590180 TAS2R9Q9NYW1 312 aa11.09□□□□□ -0.63
TPM4-212ENST00000590180 TAS2R7Q9NYW3 318 aa11.09□□□□□ -0.63
TPM4-212ENST00000590180 SH3BP4Q9P0V3 963 aa11.09□□□□□ -0.63
TPM4-212ENST00000590180 TNFRSF10DQ9UBN6 386 aa11.09□□□□□ -0.63
TPM4-212ENST00000590180 B4GALT7Q9UBV7 327 aa11.09□□□□□ -0.63
TPM4-212ENST00000590180 ZDHHC2Q9UIJ5 367 aa11.09□□□□□ -0.63
TPM4-212ENST00000590180 ACAD8Q9UKU7 415 aa11.09□□□□□ -0.63
TPM4-212ENST00000590180 EXO1Q9UQ84 846 aaKnown RBP11.09□□□□□ -0.63
TPM4-212ENST00000590180 GPR55Q9Y2T6 319 aaPredicted RBP11.09□□□□□ -0.63
TPM4-212ENST00000590180 HRH3Q9Y5N1 445 aa11.09□□□□□ -0.63
TPM4-212ENST00000590180 LIPGQ9Y5X9 500 aa11.09□□□□□ -0.63
TPM4-212ENST00000590180 C2orf72A6NCS6 295 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 NPIPB8E9PQR5 432 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 LSM1O15116 133 aaKnown RBP11.08□□□□□ -0.64
TPM4-212ENST00000590180 PLOD3O60568 738 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 PEX11AO75192 247 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 ERN1O75460 977 aaKnown RBP11.08□□□□□ -0.64
TPM4-212ENST00000590180 ERLIN1O75477 346 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 HSPA4LO95757 839 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 IGHG3P01860 377 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 GDF1P27539 372 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 KRT20P35900 424 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 TRPC1P48995 793 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 CORO7P57737 925 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 ART3Q13508 389 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 TOMM20Q15388 145 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 CEBPEQ15744 281 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 ZNF787Q6DD87 383 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 TMEM211Q6ICI0 200 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 ANKRD26P1Q6NSI1 321 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 TMEM107Q6UX40 140 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 RNF165Q6ZSG1 346 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 SLC44A2Q8IWA5 706 aaPredicted RBP11.08□□□□□ -0.64
TPM4-212ENST00000590180 CLHC1Q8NHS4 586 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 TMBIM1Q969X1 311 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 SARAFQ96BY9 339 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 PPCDCQ96CD2 204 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 ZNF597Q96LX8 424 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 PPP3R2Q96LZ3 170 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 AMDHD1Q96NU7 426 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 GNRHR2Q96P88 292 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 NODALQ96S42 347 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 ADOQ96SZ5 270 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 STMN4Q9H169 189 aaPredicted RBP11.08□□□□□ -0.64
TPM4-212ENST00000590180 TP63Q9H3D4 680 aaPredicted RBP11.08□□□□□ -0.64
TPM4-212ENST00000590180 GLIPR2Q9H4G4 154 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 REEP4Q9H6H4 257 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 FOLH1BQ9HBA9 442 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 SSU72Q9NP77 194 aaKnown RBP11.08□□□□□ -0.64
TPM4-212ENST00000590180 GIMAP2Q9UG22 337 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 TMED5Q9Y3A6 229 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 OR10H1Q9Y4A9 318 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 CENPEQ02224 2701 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 MAST4O15021 2626 aa11.08□□□□□ -0.64
TPM4-212ENST00000590180 A0A1B0GVC2 190 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 OR14I1A6ND48 311 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 FRG2CA6NGY1 282 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 LRRC3CA6NJW4 275 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 TMEM114B3SHH9 223 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 ADAM10O14672 748 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 GNB5O14775 395 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 BCKDKO14874 412 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 TO15178 435 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 BIRC5O15392 142 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 SUSD5O60279 629 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 HCN1O60741 890 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 COQ9O75208 318 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 UGT2B11O75310 529 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 TRIM3O75382 744 aaPredicted RBP11.07□□□□□ -0.64
TPM4-212ENST00000590180 SKAP2O75563 359 aaPredicted RBP11.07□□□□□ -0.64
TPM4-212ENST00000590180 LYPLA1O75608 230 aaPredicted RBP11.07□□□□□ -0.64
TPM4-212ENST00000590180 CT45A8P0DMV1 189 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 CT45A9P0DMV2 189 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 BCKDHAP12694 445 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 SDC1P18827 310 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 MAPK1P28482 360 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 HTR1EP28566 365 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 ARRB2P32121 409 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 GPC1P35052 558 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 MC3RP41968 323 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 ASMTP46597 345 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 MANFP55145 182 aaKnown RBP11.07□□□□□ -0.64
TPM4-212ENST00000590180 ZNF155Q12901 538 aaPredicted RBP11.07□□□□□ -0.64
TPM4-212ENST00000590180 CHI3L2Q15782 390 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 ATP6AP1LQ52LC2 224 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 CT45A2Q5DJT8 189 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 WLSQ5T9L3 541 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 HHATQ5VTY9 493 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 SLC30A6Q6NXT4 461 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 LRIG3Q6UXM1 1119 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 LARP4Q71RC2 724 aaKnown RBP eCLIP11.07□□□□□ -0.64
TPM4-212ENST00000590180 ZNF551Q7Z340 670 aaPredicted RBP11.07□□□□□ -0.64
TPM4-212ENST00000590180 HGDQ93099 445 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 TMCO6Q96DC7 493 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 ELP4Q96EB1 424 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 COL21A1Q96P44 957 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 CCT7Q99832 543 aa11.07□□□□□ -0.64
TPM4-212ENST00000590180 ZNF395Q9H8N7 513 aaPredicted RBP11.07□□□□□ -0.64
TPM4-212ENST00000590180 PNPLA3Q9NST1 481 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms