RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 POLR3HQ9Y535 204 aaPredicted RBP9.73□□□□□ -0.85
CLPTM1-211ENST00000589347 MAP1AP78559 2803 aaPredicted RBP9.73□□□□□ -0.85
CLPTM1-211ENST00000589347 LRRC3CA6NJW4 275 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 FOXO6A8MYZ6 492 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 UBFD1O14562 309 aaKnown RBP9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 ZNHIT1O43257 154 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 NPHS1O60500 1241 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 SEC22BO75396 215 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 WISP2O76076 250 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 LRATO95237 230 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 HOXD4P09016 255 aaPredicted RBP9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 HOXB4P17483 251 aaPredicted RBP9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 PRPH2P23942 346 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 ACVR2AP27037 513 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 MAPK1P28482 360 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 NCBP2P52298 156 aaKnown RBP eCLIP9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 FOXA1P55317 472 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 MRPS35P82673 323 aaKnown RBP9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 SNTA1Q13424 505 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 EFR3AQ14156 821 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 TOMM20Q15388 145 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 SF3B4Q15427 424 aaKnown RBP eCLIP9.72□□□□□ -0.852e-6■■■■□ 20.9
CLPTM1-211ENST00000589347 CEBPEQ15744 281 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 SLC30A6Q6NXT4 461 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 TMEM81Q6P7N7 255 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 B3GNT6Q6ZMB0 384 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 RNF165Q6ZSG1 346 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 NUP54Q7Z3B4 507 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 OR2W6PQ8NHA6 318 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 ZFP28Q8NHY6 868 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 TMCO6Q96DC7 493 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 TMEM41AQ96HV5 264 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 ZNF681Q96N22 645 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 FAM111AQ96PZ2 611 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 LRTM1Q9HBL6 345 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 ACKR4Q9NPB9 350 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 C1orf109Q9NX04 203 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 TAS2R9Q9NYW1 312 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 C15orf41Q9Y2V0 281 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 TMED5Q9Y3A6 229 aa9.72□□□□□ -0.85
CLPTM1-211ENST00000589347 NUP214P35658 2090 aaPredicted RBP9.71□□□□□ -0.85
CLPTM1-211ENST00000589347 C15orf38-AP3S2A0A0A6YYH1 394 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 PRAMEF25A6NGN4 478 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 NPIPB8E9PQR5 432 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 TO15178 435 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 PDPK1O15530 556 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 ZNF500O60304 480 aaPredicted RBP9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 TRIM3O75382 744 aaPredicted RBP9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 ERN1O75460 977 aaKnown RBP9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 TRAPPC6AO75865 159 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 ABCB1P08183 1280 aaPredicted RBP9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 S1PR1P21453 382 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 DRD5P21918 477 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 CASP3P42574 277 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 PPICP45877 212 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 MGAT2Q10469 447 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 ZNHIT3Q15649 155 aaPredicted RBP9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 KRT71Q3SY84 523 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 GXYLT1Q4G148 440 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 C1orf185Q5T7R7 199 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 FAM219BQ5XKK7 198 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 CLEC6AQ6EIG7 209 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 FAM71E1Q6IPT2 247 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 NOXRED1Q6NXP6 359 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 FAM180BQ6P0A1 224 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 TMEM64Q6YI46 380 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 NCCRP1Q6ZVX7 275 aaPredicted RBP9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 DDIASQ8IXT1 998 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 PM20D2Q8IYS1 436 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 BANPQ8N9N5 519 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 OR5M9Q8NGP3 310 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 OR1J4Q8NGS1 313 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 PPP1R14CQ8TAE6 165 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 NEIL3Q8TAT5 605 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 KAT2AQ92830 837 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 C11orf24Q96F05 449 aaPredicted RBP9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 BTBD9Q96Q07 612 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 CCT7Q99832 543 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 ANGPTL4Q9BY76 406 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 TRIM8Q9BZR9 551 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 SLC6A15Q9H2J7 730 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 FOLH1BQ9HBA9 442 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 PNPLA3Q9NST1 481 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 DDX18Q9NVP1 670 aaKnown RBP9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 MRTO4Q9UKD2 239 aaKnown RBP9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 DTX4Q9Y2E6 619 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 OR10H1Q9Y4A9 318 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 PCDHGB3Q9Y5G1 929 aa9.71□□□□□ -0.86
CLPTM1-211ENST00000589347 ZNF469Q96JG9 3925 aaPredicted RBP9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 A0A087WV62 115 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 OR6C70A6NIJ9 312 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 FAM90A27PA6NNH2 459 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 TMEM114B3SHH9 223 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 ADAM10O14672 748 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 SNPHO15079 494 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 RGS16O15492 202 aaPredicted RBP9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 PLOD3O60568 738 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 REM1O75628 298 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 TUBBP07437 444 aa9.7□□□□□ -0.86
CLPTM1-211ENST00000589347 CELA3AP09093 270 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms