RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 FBXO25Q8TCJ0 367 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 SLC44A1Q8WWI5 657 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 PIGTQ969N2 578 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 ERP27Q96DN0 273 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 BRINP2Q9C0B6 783 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 SERHLQ9NQF3 203 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 NMRK1Q9NWW6 199 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 CPSF2Q9P2I0 782 aaKnown RBP12.71□□□□□ -0.37
VMP1-209ENST00000588915 BCAP29Q9UHQ4 241 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 PACSIN3Q9UKS6 424 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 DTX4Q9Y2E6 619 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 DLGAP4Q9Y2H0 992 aa12.71□□□□□ -0.37
VMP1-209ENST00000588915 PRAMEF25A6NGN4 478 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 FRG2CA6NGY1 282 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 UGT2B11O75310 529 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 CBX7O95931 251 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 HEXAP06865 529 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 SOX18P35713 384 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 ARL1P40616 181 aaPredicted RBP12.7□□□□□ -0.38
VMP1-209ENST00000588915 LHX2P50458 406 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 TECRLQ5HYJ1 363 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 CLEC9AQ6UXN8 241 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 CCDC25Q86WR0 208 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 PLCZ1Q86YW0 608 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 PTGR2Q8N8N7 351 aaPredicted RBP12.7□□□□□ -0.38
VMP1-209ENST00000588915 INTS12Q96CB8 462 aaKnown RBP12.7□□□□□ -0.38
VMP1-209ENST00000588915 TM4SF18Q96CE8 201 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 ARSGQ96EG1 525 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 SLC35A4Q96G79 324 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 CDK15Q96Q40 435 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 G6PC3Q9BUM1 346 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 ITPAQ9BY32 194 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 MRPL1Q9BYD6 325 aaKnown RBP12.7□□□□□ -0.38
VMP1-209ENST00000588915 BRF2Q9HAW0 419 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 GALNT9Q9HCQ5 603 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 TAS2R10Q9NYW0 307 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 MAPRE3Q9UPY8 281 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 GPR55Q9Y2T6 319 aaPredicted RBP12.7□□□□□ -0.38
VMP1-209ENST00000588915 ZNF780BQ9Y6R6 833 aa12.7□□□□□ -0.38
VMP1-209ENST00000588915 NSD1Q96L73 2696 aaPredicted RBP12.7□□□□□ -0.38
VMP1-209ENST00000588915 DNHD1Q96M86 4753 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 MED12Q93074 2177 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 A0A1W2PPR1 153 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 PLOD2O00469 737 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 HCRTR2O43614 444 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 ERAL1O75616 437 aaKnown RBP12.69□□□□□ -0.38
VMP1-209ENST00000588915 ALDOAP04075 364 aaKnown RBP12.69□□□□□ -0.38
VMP1-209ENST00000588915 ZNF708P17019 499 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 FEN1P39748 380 aaKnown RBP12.69□□□□□ -0.38
VMP1-209ENST00000588915 EMDP50402 254 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 SERPINB8P50452 374 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 HMGCS1Q01581 520 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 SRYQ05066 204 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 TRAF3Q13114 568 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 DESI1Q6ICB0 168 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 OR2A2Q6IF42 318 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 COMMD6Q7Z4G1 85 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 MILR1Q7Z6M3 343 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 ZNF675Q8TD23 568 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 ZNF681Q96N22 645 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 COL21A1Q96P44 957 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 SMR3AQ99954 134 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 FAIM2Q9BWQ8 316 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 ELOVL6Q9H5J4 265 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 ZBTB26Q9HCK0 441 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 ZNF226Q9NYT6 803 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 PCTPQ9UKL6 214 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 PLLPQ9Y342 182 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 TESMINQ9Y4I5 508 aa12.69□□□□□ -0.38
VMP1-209ENST00000588915 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 CTIFO43310 598 aaKnown RBP12.68□□□□□ -0.38
VMP1-209ENST00000588915 SMIM24O75264 130 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 TNFSF13O75888 250 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 COL6A2P12110 1019 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 FPR1P21462 350 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 PHBP35232 272 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 MC3RP41968 323 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 CLDN18P56856 261 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 GALNT1Q10472 559 aaPredicted RBP12.68□□□□□ -0.38
VMP1-209ENST00000588915 EFR3AQ14156 821 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 EXOSC7Q15024 291 aaKnown RBP12.68□□□□□ -0.38
VMP1-209ENST00000588915 POU4F3Q15319 338 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 NNATQ16517 81 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 TRMT12Q53H54 448 aaKnown RBP12.68□□□□□ -0.38
VMP1-209ENST00000588915 ZDHHC24Q6UX98 284 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 GRAMD2AQ8IUY3 354 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 P3H2Q8IVL5 708 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 SAMD14Q8IZD0 417 aaPredicted RBP12.68□□□□□ -0.38
VMP1-209ENST00000588915 ADCY4Q8NFM4 1077 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 OR52R1Q8NGF1 315 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 RNF138Q8WVD3 245 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 ZNF592Q92610 1267 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 PHF21BQ96EK2 531 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 SFXN2Q96NB2 322 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 BTBD9Q96Q07 612 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 ZNF395Q9H8N7 513 aaPredicted RBP12.68□□□□□ -0.38
VMP1-209ENST00000588915 SLC12A4Q9UP95 1085 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 WIF1Q9Y5W5 379 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 MED12LQ86YW9 2145 aa12.68□□□□□ -0.38
VMP1-209ENST00000588915 ARID1AO14497 2285 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms