RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 ZNF155Q12901 538 aaPredicted RBP20.74■□□□□ 0.91
ATG4D-209ENST00000588857 MRPL14Q6P1L8 145 aaKnown RBP20.74■□□□□ 0.91
ATG4D-209ENST00000588857 FAM199XQ6PEV8 388 aaPredicted RBP20.74■□□□□ 0.91
ATG4D-209ENST00000588857 C16orf62Q7Z3J2 963 aa20.74■□□□□ 0.91
ATG4D-209ENST00000588857 WDR53Q7Z5U6 358 aaPredicted RBP20.74■□□□□ 0.91
ATG4D-209ENST00000588857 GALNT10Q86SR1 603 aa20.74■□□□□ 0.91
ATG4D-209ENST00000588857 PATL1Q86TB9 770 aaKnown RBP20.74■□□□□ 0.91
ATG4D-209ENST00000588857 SLC16A11Q8NCK7 471 aa20.74■□□□□ 0.91
ATG4D-209ENST00000588857 DAZLQ92904 295 aaKnown RBP20.74■□□□□ 0.91
ATG4D-209ENST00000588857 SLCO4A1Q96BD0 722 aa20.74■□□□□ 0.91
ATG4D-209ENST00000588857 SLC35A4Q96G79 324 aa20.74■□□□□ 0.91
ATG4D-209ENST00000588857 SEPHS2Q99611 448 aa20.74■□□□□ 0.91
ATG4D-209ENST00000588857 ADPRHL2Q9NX46 363 aa20.74■□□□□ 0.91
ATG4D-209ENST00000588857 SATB2Q9UPW6 733 aa20.74■□□□□ 0.91
ATG4D-209ENST00000588857 LIPT1Q9Y234 373 aa20.74■□□□□ 0.91
ATG4D-209ENST00000588857 PCDHGB3Q9Y5G1 929 aa20.74■□□□□ 0.91
ATG4D-209ENST00000588857 HRKO00198 91 aa20.73■□□□□ 0.91
ATG4D-209ENST00000588857 IFNA14P01570 189 aa20.73■□□□□ 0.91
ATG4D-209ENST00000588857 CCNYL3P0C7X3 344 aa20.73■□□□□ 0.91
ATG4D-209ENST00000588857 SLC5A2P31639 672 aa20.73■□□□□ 0.91
ATG4D-209ENST00000588857 CLCN2P51788 898 aa20.73■□□□□ 0.91
ATG4D-209ENST00000588857 SYPL1Q16563 259 aa20.73■□□□□ 0.91
ATG4D-209ENST00000588857 FAM98BQ52LJ0 330 aaKnown RBP20.73■□□□□ 0.91
ATG4D-209ENST00000588857 TBCELQ5QJ74 424 aa20.73■□□□□ 0.91
ATG4D-209ENST00000588857 FAAH2Q6GMR7 532 aa20.73■□□□□ 0.91
ATG4D-209ENST00000588857 C6orf15Q6UXA7 325 aaPredicted RBP20.73■□□□□ 0.91
ATG4D-209ENST00000588857 CCDC80Q76M96 950 aa20.73■□□□□ 0.91
ATG4D-209ENST00000588857 OR7G1Q8NGA0 311 aa20.73■□□□□ 0.91
ATG4D-209ENST00000588857 OR14A16Q8NHC5 309 aa20.73■□□□□ 0.91
ATG4D-209ENST00000588857 SENP5Q96HI0 755 aaPredicted RBP20.73■□□□□ 0.91
ATG4D-209ENST00000588857 ARMC1Q9NVT9 282 aa20.73■□□□□ 0.91
ATG4D-209ENST00000588857 C3orf18Q9UK00 162 aa20.73■□□□□ 0.91
ATG4D-209ENST00000588857 TEX51A0A1B0GUA7 166 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 A0A1W2PNU3 283 aaPredicted RBP20.72■□□□□ 0.91
ATG4D-209ENST00000588857 ALOX12BO75342 701 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 PDE9AO76083 593 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 PRKD3O94806 890 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 SOX30O94993 753 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 PGM3O95394 542 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 CYC1P08574 325 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 ACP2P11117 423 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 CRISP3P54108 245 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 FOXL2P58012 376 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 CHRNB3Q05901 458 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 SLC34A1Q06495 639 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 TARDBPQ13148 414 aaKnown RBP eCLIP20.72■□□□□ 0.91
ATG4D-209ENST00000588857 DUSP8Q13202 625 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 ZNHIT3Q15649 155 aaPredicted RBP20.72■□□□□ 0.91
ATG4D-209ENST00000588857 GPAT3Q53EU6 434 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 ENPP6Q6UWR7 440 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 TMPRSS12Q86WS5 348 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 CACTIN-AS1Q8N1I8 211 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 ANKFN1Q8N957 763 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 CDS1Q92903 461 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 FBXL20Q96IG2 436 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 ART5Q96L15 291 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 RNF145Q96MT1 663 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 STACQ99469 402 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 SPSB2Q99619 263 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 CRB3Q9BUF7 120 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 OR10A5Q9H207 317 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 PIGUQ9H490 435 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 PADI1Q9ULC6 663 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 HEMK1Q9Y5R4 338 aaPredicted RBP20.72■□□□□ 0.91
ATG4D-209ENST00000588857 KCNE3Q9Y6H6 103 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 C9orf172C9J069 976 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 CNOT3O75175 753 aaKnown RBP20.72■□□□□ 0.91
ATG4D-209ENST00000588857 GCM2O75603 506 aaPredicted RBP20.72■□□□□ 0.91
ATG4D-209ENST00000588857 EMDP50402 254 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 PCBP3P57721 371 aaKnown RBP20.72■□□□□ 0.91
ATG4D-209ENST00000588857 SESN3P58005 492 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 DUSP5Q16690 384 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 CYBRD1Q53TN4 286 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 CRB2Q5IJ48 1285 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 IRAK1BP1Q5VVH5 260 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 ZNF517Q6ZMY9 492 aaPredicted RBP20.72■□□□□ 0.91
ATG4D-209ENST00000588857 LANCL3Q6ZV70 420 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 CBLL1Q75N03 491 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 GPR151Q8TDV0 419 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 PYURFQ96I23 114 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 CNTNAP3BQ96NU0 1288 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 ZNF607Q96SK3 696 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 TREX2Q9BQ50 279 aaPredicted RBP20.72■□□□□ 0.91
ATG4D-209ENST00000588857 CNTNAP3Q9BZ76 1288 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 OR8D2Q9GZM6 311 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 FOLH1BQ9HBA9 442 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 DUSP22Q9NRW4 184 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 GIN1Q9NXP7 522 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 CALML5Q9NZT1 146 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 PRODH2Q9UF12 536 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 KLK13Q9UKR3 277 aa20.72■□□□□ 0.91
ATG4D-209ENST00000588857 TPRP12270 2363 aaKnown RBP20.71■□□□□ 0.91
ATG4D-209ENST00000588857 PRAMEF27A3QJZ7 478 aa20.71■□□□□ 0.91
ATG4D-209ENST00000588857 M0QX08 132 aa20.71■□□□□ 0.91
ATG4D-209ENST00000588857 HNRNPRO43390 633 aaKnown RBP20.71■□□□□ 0.91
ATG4D-209ENST00000588857 SUV39H1O43463 412 aa20.71■□□□□ 0.91
ATG4D-209ENST00000588857 CD63P08962 238 aa20.71■□□□□ 0.91
ATG4D-209ENST00000588857 HOXB6P17509 224 aaKnown RBP20.71■□□□□ 0.91
ATG4D-209ENST00000588857 HPCAP84074 193 aa20.71■□□□□ 0.91
ATG4D-209ENST00000588857 ELOAQ14241 798 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms