RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 CDS1Q92903 461 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 RSPO3Q9BXY4 272 aaPredicted RBP24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 SEMA6AQ9H2E6 1030 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 DUSP22Q9NRW4 184 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 ERVK-19Q9WJR5 959 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 DMXL1Q9Y485 3027 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 RIF1Q5UIP0 2472 aaKnown RBP24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 C17orf105B2RV13 164 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 AGR2O95994 175 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 PGDP52209 483 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 GNA13Q14344 377 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 ATP6AP1Q15904 470 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 PRAMEF8Q5VWM4 474 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 PRAMEF7Q5VXH5 474 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 SHISA6Q6ZSJ9 500 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 SLCO6A1Q86UG4 719 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 TRNT1Q96Q11 434 aaKnown RBP24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 STACQ99469 402 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 DOHHQ9BU89 302 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 CNPPD1Q9BV87 410 aa24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 PNO1Q9NRX1 252 aaKnown RBP24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 IFT80Q9P2H3 777 aaPredicted RBP24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 HEMK1Q9Y5R4 338 aaPredicted RBP24.24■■□□□ 1.47
SCAMP4-210ENST00000588555 PMS2P1A4D2B8 440 aa24.23■■□□□ 1.47
SCAMP4-210ENST00000588555 FAM149AA5PLN7 773 aa24.23■■□□□ 1.47
SCAMP4-210ENST00000588555 IFNA14P01570 189 aa24.23■■□□□ 1.47
SCAMP4-210ENST00000588555 KCNJ10P78508 379 aa24.23■■□□□ 1.47
SCAMP4-210ENST00000588555 ELAVL1Q15717 326 aaKnown RBP24.23■■□□□ 1.47
SCAMP4-210ENST00000588555 ATAD3BQ5T9A4 648 aa24.23■■□□□ 1.47
SCAMP4-210ENST00000588555 MRPL14Q6P1L8 145 aaKnown RBP24.23■■□□□ 1.47
SCAMP4-210ENST00000588555 ZNF615Q8N8J6 731 aa24.23■■□□□ 1.47
SCAMP4-210ENST00000588555 DEFB124Q8NES8 71 aa24.23■■□□□ 1.47
SCAMP4-210ENST00000588555 BBS10Q8TAM1 723 aa24.23■■□□□ 1.47
SCAMP4-210ENST00000588555 FKBP10Q96AY3 582 aa24.23■■□□□ 1.47
SCAMP4-210ENST00000588555 TPD52L3Q96J77 140 aa24.23■■□□□ 1.47
SCAMP4-210ENST00000588555 VSTM2LQ96N03 204 aa24.23■■□□□ 1.47
SCAMP4-210ENST00000588555 ULBP3Q9BZM4 244 aa24.23■■□□□ 1.47
SCAMP4-210ENST00000588555 SLC38A1Q9H2H9 487 aa24.23■■□□□ 1.47
SCAMP4-210ENST00000588555 YY1AP1Q9H869 796 aa24.23■■□□□ 1.47
SCAMP4-210ENST00000588555 EXD2Q9NVH0 621 aa24.23■■□□□ 1.47
SCAMP4-210ENST00000588555 PCDHGA8Q9Y5G5 932 aa24.23■■□□□ 1.47
SCAMP4-210ENST00000588555 B3GALT1Q9Y5Z6 326 aa24.23■■□□□ 1.47
SCAMP4-210ENST00000588555 GPC6Q9Y625 555 aaPredicted RBP24.23■■□□□ 1.47
SCAMP4-210ENST00000588555 A8MVJ9 347 aa24.22■■□□□ 1.47
SCAMP4-210ENST00000588555 PROB1E7EW31 1015 aa24.22■■□□□ 1.47
SCAMP4-210ENST00000588555 PDE9AO76083 593 aa24.22■■□□□ 1.47
SCAMP4-210ENST00000588555 DKK1O94907 266 aa24.22■■□□□ 1.47
SCAMP4-210ENST00000588555 MFN2O95140 757 aa24.22■■□□□ 1.47
SCAMP4-210ENST00000588555 H6PDO95479 791 aa24.22■■□□□ 1.47
SCAMP4-210ENST00000588555 ALBP02768 609 aa24.22■■□□□ 1.47
SCAMP4-210ENST00000588555 ALOX5P09917 674 aa24.22■■□□□ 1.47
SCAMP4-210ENST00000588555 TNNI3P19429 210 aa24.22■■□□□ 1.47
SCAMP4-210ENST00000588555 RAB15P59190 212 aa24.22■■□□□ 1.47
SCAMP4-210ENST00000588555 SPSB2Q99619 263 aa24.22■■□□□ 1.47
SCAMP4-210ENST00000588555 LMF2Q9BU23 707 aaKnown RBP24.22■■□□□ 1.47
SCAMP4-210ENST00000588555 FOLH1BQ9HBA9 442 aa24.22■■□□□ 1.47
SCAMP4-210ENST00000588555 IL1RAPQ9NPH3 570 aa24.22■■□□□ 1.47
SCAMP4-210ENST00000588555 DTX4Q9Y2E6 619 aa24.22■■□□□ 1.47
SCAMP4-210ENST00000588555 DSPPQ9NZW4 1301 aa24.22■■□□□ 1.47
SCAMP4-210ENST00000588555 A0A1W2PNU3 283 aaPredicted RBP24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 PRAMEF2O60811 474 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 ZIC2O95409 532 aaPredicted RBP24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 ZNF155Q12901 538 aaPredicted RBP24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 LRRC36Q1X8D7 754 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 ARHGAP11BQ3KRB8 267 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 GPAT3Q53EU6 434 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 DCAF12Q5T6F0 453 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 ZNF517Q6ZMY9 492 aaPredicted RBP24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 C16orf62Q7Z3J2 963 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 CENPNQ96H22 339 aaPredicted RBP24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 SENP5Q96HI0 755 aaPredicted RBP24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 FBXL20Q96IG2 436 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 C7orf34Q96L11 122 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 ZNF607Q96SK3 696 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 TACO1Q9BSH4 297 aaKnown RBP24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 BTBD2Q9BX70 525 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 OR10A5Q9H207 317 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 A0A0G2JPF8 293 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 HNRNPCL2B2RXH8 293 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 IDSB3KWA1 339 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 HNRNPCL3B7ZW38 293 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 NKX2-2O95096 273 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 HNRNPCL4P0DMR1 293 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 ETS2P15036 469 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 CD247P20963 164 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 AGXTP21549 392 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 PSG6Q00889 435 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 IQCCQ4KMZ1 466 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 HES3Q5TGS1 186 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 MLIPQ5VWP3 458 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 LANCL3Q6ZV70 420 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 FKBP9P1Q75LS8 142 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 SMYD1Q8NB12 490 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 CHDHQ8NE62 594 aaPredicted RBP24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 OR7G1Q8NGA0 311 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 COL21A1Q96P44 957 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 DEPDC7Q96QD5 511 aa24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 SOX17Q9H6I2 414 aaPredicted RBP24.21■■□□□ 1.47
SCAMP4-210ENST00000588555 SATB2Q9UPW6 733 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms