RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 FRG2CA6NGY1 282 aa18.6■□□□□ 0.57
DDX39A-207ENST00000588542 KIR3DP1A8MWS1 328 aa18.6■□□□□ 0.57
DDX39A-207ENST00000588542 TCP11X1B4DZS4 312 aa18.6■□□□□ 0.57
DDX39A-207ENST00000588542 PEX1O43933 1283 aa18.6■□□□□ 0.57
DDX39A-207ENST00000588542 EDF1O60869 148 aaKnown RBP18.6■□□□□ 0.57
DDX39A-207ENST00000588542 IL12AP29459 219 aa18.6■□□□□ 0.57
DDX39A-207ENST00000588542 IDH3AP50213 366 aa18.6■□□□□ 0.57
DDX39A-207ENST00000588542 MEOX1P50221 254 aa18.6■□□□□ 0.57
DDX39A-207ENST00000588542 NME5P56597 212 aa18.6■□□□□ 0.57
DDX39A-207ENST00000588542 NRG3P56975 720 aa18.6■□□□□ 0.57
DDX39A-207ENST00000588542 GPR85P60893 370 aa18.6■□□□□ 0.57
DDX39A-207ENST00000588542 OR4F3Q6IEY1 312 aa18.6■□□□□ 0.57
DDX39A-207ENST00000588542 OR10G3Q8NGC4 313 aa18.6■□□□□ 0.57
DDX39A-207ENST00000588542 OR8J2Q8NGG1 315 aa18.6■□□□□ 0.57
DDX39A-207ENST00000588542 PSMA8Q8TAA3 256 aa18.6■□□□□ 0.57
DDX39A-207ENST00000588542 MARK4Q96L34 752 aa18.6■□□□□ 0.57
DDX39A-207ENST00000588542 SLX1AQ9BQ83 275 aa18.6■□□□□ 0.57
DDX39A-207ENST00000588542 EBF4Q9BQW3 602 aa18.6■□□□□ 0.57
DDX39A-207ENST00000588542 CLMPQ9H6B4 373 aa18.6■□□□□ 0.57
DDX39A-207ENST00000588542 AGPAT4Q9NRZ5 378 aa18.6■□□□□ 0.57
DDX39A-207ENST00000588542 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 PINLYPA6NC86 204 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 SCN2BO60939 215 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 WISP2O76076 250 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 C6orf47O95873 294 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 ABCB1P08183 1280 aaPredicted RBP18.59■□□□□ 0.57
DDX39A-207ENST00000588542 NAGAP17050 411 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 MST1P26927 711 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 TDGF1P3P51864 188 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 AQP5P55064 265 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 FBXW4P57775 412 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 PSG6Q00889 435 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 ZNF155Q12901 538 aaPredicted RBP18.59■□□□□ 0.57
DDX39A-207ENST00000588542 RNFT1Q5M7Z0 435 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 SLC22A10Q63ZE4 541 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 GALNT11Q8NCW6 608 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 FAM13CQ8NE31 585 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 NUP43Q8NFH3 380 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 NR4A3Q92570 626 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 HOXB13Q92826 284 aaPredicted RBP18.59■□□□□ 0.57
DDX39A-207ENST00000588542 OMA1Q96E52 524 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 GIMAP5Q96F15 307 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 CXorf36Q9H7Y0 433 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 PROK2Q9HC23 129 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 SACM1LQ9NTJ5 587 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 OLAHQ9NV23 265 aa18.59■□□□□ 0.57
DDX39A-207ENST00000588542 CNOT11Q9UKZ1 510 aaKnown RBP18.59■□□□□ 0.57
DDX39A-207ENST00000588542 CAPN14A8MX76 684 aa18.58■□□□□ 0.56
DDX39A-207ENST00000588542 G3V3Y1 287 aa18.58■□□□□ 0.56
DDX39A-207ENST00000588542 KLRC4-KLRK1H3BQV0 150 aa18.58■□□□□ 0.56
DDX39A-207ENST00000588542 EMC8O43402 210 aa18.58■□□□□ 0.56
DDX39A-207ENST00000588542 PPM1BO75688 479 aa18.58■□□□□ 0.56
DDX39A-207ENST00000588542 CRYABP02511 175 aaKnown RBP18.58■□□□□ 0.56
DDX39A-207ENST00000588542 IDO1P14902 403 aa18.58■□□□□ 0.56
DDX39A-207ENST00000588542 CNR1P21554 472 aa18.58■□□□□ 0.56
DDX39A-207ENST00000588542 MAP3K8P41279 467 aa18.58■□□□□ 0.56
DDX39A-207ENST00000588542 CLNS1AP54105 237 aaKnown RBP18.58■□□□□ 0.56
DDX39A-207ENST00000588542 RPS6KA2Q15349 733 aa18.58■□□□□ 0.56
DDX39A-207ENST00000588542 PDCD4Q53EL6 469 aaKnown RBP18.58■□□□□ 0.56
DDX39A-207ENST00000588542 SPANXN4Q5MJ08 99 aa18.58■□□□□ 0.56
DDX39A-207ENST00000588542 DESI1Q6ICB0 168 aa18.58■□□□□ 0.56
DDX39A-207ENST00000588542 WDR53Q7Z5U6 358 aaPredicted RBP18.58■□□□□ 0.56
DDX39A-207ENST00000588542 SLC44A2Q8IWA5 706 aaPredicted RBP18.58■□□□□ 0.56
DDX39A-207ENST00000588542 CLECL1Q8IZS7 167 aa18.58■□□□□ 0.56
DDX39A-207ENST00000588542 SLC34A3Q8N130 599 aa18.58■□□□□ 0.56
DDX39A-207ENST00000588542 FBXW8Q8N3Y1 598 aa18.58■□□□□ 0.56
DDX39A-207ENST00000588542 FAM98AQ8NCA5 519 aaKnown RBP18.58■□□□□ 0.56
DDX39A-207ENST00000588542 OR2M7Q8NG81 312 aa18.58■□□□□ 0.56
DDX39A-207ENST00000588542 OR4N2Q8NGD1 307 aa18.58■□□□□ 0.56
DDX39A-207ENST00000588542 OR5M3Q8NGP4 307 aa18.58■□□□□ 0.56
DDX39A-207ENST00000588542 FAM120BQ96EK7 910 aaKnown RBP18.58■□□□□ 0.56
DDX39A-207ENST00000588542 LMF2Q9BU23 707 aaKnown RBP18.58■□□□□ 0.56
DDX39A-207ENST00000588542 C3orf14Q9HBI5 128 aa18.58■□□□□ 0.56
DDX39A-207ENST00000588542 TCF7L2Q9NQB0 619 aa18.58■□□□□ 0.56
DDX39A-207ENST00000588542 ESPL1Q14674 2120 aa18.58■□□□□ 0.56
DDX39A-207ENST00000588542 C9JVG2 144 aa18.57■□□□□ 0.56
DDX39A-207ENST00000588542 E9PBE3 544 aa18.57■□□□□ 0.56
DDX39A-207ENST00000588542 RNASET2O00584 256 aaKnown RBP18.57■□□□□ 0.56
DDX39A-207ENST00000588542 UBDO15205 165 aa18.57■□□□□ 0.56
DDX39A-207ENST00000588542 CBX6O95503 412 aa18.57■□□□□ 0.56
DDX39A-207ENST00000588542 P04436 131 aa18.57■□□□□ 0.56
DDX39A-207ENST00000588542 PIGAP37287 484 aa18.57■□□□□ 0.56
DDX39A-207ENST00000588542 RFC3P40938 356 aa18.57■□□□□ 0.56
DDX39A-207ENST00000588542 KIR3DL1P43629 444 aa18.57■□□□□ 0.56
DDX39A-207ENST00000588542 TMED10P49755 219 aaKnown RBP18.57■□□□□ 0.56
DDX39A-207ENST00000588542 PRKAG1P54619 331 aa18.57■□□□□ 0.56
DDX39A-207ENST00000588542 HBA1P69905 142 aa18.57■□□□□ 0.56
DDX39A-207ENST00000588542 PLCXD2Q0VAA5 305 aa18.57■□□□□ 0.56
DDX39A-207ENST00000588542 GSTA3Q16772 222 aa18.57■□□□□ 0.56
DDX39A-207ENST00000588542 DPY19L1Q2PZI1 675 aa18.57■□□□□ 0.56
DDX39A-207ENST00000588542 ACAD11Q709F0 780 aa18.57■□□□□ 0.56
DDX39A-207ENST00000588542 SIAH3Q8IW03 269 aa18.57■□□□□ 0.56
DDX39A-207ENST00000588542 ZFP62Q8NB50 900 aaPredicted RBP18.57■□□□□ 0.56
DDX39A-207ENST00000588542 POGLUT1Q8NBL1 392 aa18.57■□□□□ 0.56
DDX39A-207ENST00000588542 HGDQ93099 445 aa18.57■□□□□ 0.56
DDX39A-207ENST00000588542 TMBIM1Q969X1 311 aa18.57■□□□□ 0.56
DDX39A-207ENST00000588542 CCDC28BQ9BUN5 200 aa18.57■□□□□ 0.56
DDX39A-207ENST00000588542 EQTNQ9NQ60 294 aa18.57■□□□□ 0.56
DDX39A-207ENST00000588542 CNIH4Q9P003 139 aa18.57■□□□□ 0.56
DDX39A-207ENST00000588542 FREM3P0C091 2139 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms