RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 PHF3Q92576 2039 aaKnown RBP13.07□□□□□ -0.32
VMP1-206ENST00000587945 GNG14A0A1W2PPG7 69 aa13.07□□□□□ -0.32
VMP1-206ENST00000587945 PRAMEF25A6NGN4 478 aa13.07□□□□□ -0.32
VMP1-206ENST00000587945 DVL2O14641 736 aa13.07□□□□□ -0.32
VMP1-206ENST00000587945 REM1O75628 298 aa13.07□□□□□ -0.32
VMP1-206ENST00000587945 CTAG2O75638 210 aa13.07□□□□□ -0.32
VMP1-206ENST00000587945 DRD5P21918 477 aa13.07□□□□□ -0.32
VMP1-206ENST00000587945 DNAJA1P31689 397 aaKnown RBP13.07□□□□□ -0.32
VMP1-206ENST00000587945 TIMP3P35625 211 aa13.07□□□□□ -0.32
VMP1-206ENST00000587945 ART1P52961 327 aa13.07□□□□□ -0.32
VMP1-206ENST00000587945 CORO7P57737 925 aa13.07□□□□□ -0.32
VMP1-206ENST00000587945 NHSL2Q5HYW2 709 aa13.07□□□□□ -0.32
VMP1-206ENST00000587945 NSUN5P2Q63ZY6 315 aa13.07□□□□□ -0.32
VMP1-206ENST00000587945 SLC30A6Q6NXT4 461 aa13.07□□□□□ -0.32
VMP1-206ENST00000587945 SPNS3Q6ZMD2 512 aa13.07□□□□□ -0.32
VMP1-206ENST00000587945 WDSUB1Q8N9V3 476 aa13.07□□□□□ -0.32
VMP1-206ENST00000587945 SH3GL2Q99962 352 aa13.07□□□□□ -0.32
VMP1-206ENST00000587945 GPATCH1Q9BRR8 931 aaKnown RBP13.07□□□□□ -0.32
VMP1-206ENST00000587945 DNAJB12Q9NXW2 375 aaKnown RBP13.07□□□□□ -0.32
VMP1-206ENST00000587945 TBK1Q9UHD2 729 aa13.07□□□□□ -0.32
VMP1-206ENST00000587945 GPR55Q9Y2T6 319 aaPredicted RBP13.07□□□□□ -0.32
VMP1-206ENST00000587945 FRG2CA6NGY1 282 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 CD8B2A6NJW9 211 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 TO15178 435 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 CDH16O75309 829 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 IL2RAP01589 272 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 RHOXF2BP0C7M4 288 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 CT45A8P0DMV1 189 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 CT45A9P0DMV2 189 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 DRD2P14416 443 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 TIA1P31483 386 aaKnown RBP eCLIP13.06□□□□□ -0.32
VMP1-206ENST00000587945 ASCL1P50553 236 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 FOXA1P55317 472 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 DCAF7P61962 342 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 ACSM2AQ08AH3 577 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 LCP2Q13094 533 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 SLC29A2Q14542 456 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 PRSS53Q2L4Q9 553 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 CT45A2Q5DJT8 189 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 ACSM2BQ68CK6 577 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 TMEM81Q6P7N7 255 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 PLXDC2Q6UX71 529 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 NPSR1Q6W5P4 371 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 SLC22A9Q8IVM8 553 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 IFT20Q8IY31 132 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 GSPT2Q8IYD1 628 aaKnown RBP13.06□□□□□ -0.32
VMP1-206ENST00000587945 CCNYL1Q8N7R7 359 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 GBP7Q8N8V2 638 aaPredicted RBP13.06□□□□□ -0.32
VMP1-206ENST00000587945 C9orf106Q8NAJ2 232 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 ZNF675Q8TD23 568 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 MZB1Q8WU39 189 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 RNASE6Q93091 150 aaKnown RBP13.06□□□□□ -0.32
VMP1-206ENST00000587945 L3HYPDHQ96EM0 354 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 COL21A1Q96P44 957 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 ADOQ96SZ5 270 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 RHOXF2Q9BQY4 288 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 TXLNGYQ9BZA5 131 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 LIME1Q9H400 295 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 GSTO2Q9H4Y5 243 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 SLC35C2Q9NQQ7 365 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 ZNF629Q9UEG4 869 aaPredicted RBP13.06□□□□□ -0.32
VMP1-206ENST00000587945 EMCNQ9ULC0 261 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 EXO1Q9UQ84 846 aaKnown RBP13.06□□□□□ -0.32
VMP1-206ENST00000587945 HCFC1P51610 2035 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 NINQ8N4C6 2090 aa13.06□□□□□ -0.32
VMP1-206ENST00000587945 NCKAP5O14513 1909 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 A0A1W2PPM1 405 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 OR6C70A6NIJ9 312 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 C17orf51A8MQB3 221 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 UBFD1O14562 309 aaKnown RBP13.05□□□□□ -0.32
VMP1-206ENST00000587945 TCEA1P23193 301 aaKnown RBP13.05□□□□□ -0.32
VMP1-206ENST00000587945 SLCO1A2P46721 670 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 IST1P53990 364 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 PKNOX1P55347 436 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 SRYQ05066 204 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 SNTA1Q13424 505 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 SPIN4Q56A73 249 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 SPDYAQ5MJ70 313 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 OR5M10Q6IEU7 315 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 LCA5Q86VQ0 697 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 TRIM42Q8IWZ5 723 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 CEP112Q8N8E3 955 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 OR7G2Q8NG99 324 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 OR4N2Q8NGD1 307 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 OR14L1PQ8NHC6 308 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 CDC26Q8NHZ8 85 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 ACMSDQ8TDX5 336 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 TMCO6Q96DC7 493 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 C11orf24Q96F05 449 aaPredicted RBP13.05□□□□□ -0.32
VMP1-206ENST00000587945 VSTM2LQ96N03 204 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 BTBD9Q96Q07 612 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 TUBA1CQ9BQE3 449 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 POLDIP3Q9BY77 421 aaKnown RBP13.05□□□□□ -0.32
VMP1-206ENST00000587945 FOLH1BQ9HBA9 442 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 MID1IP1Q9NPA3 183 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 PSMC3IPQ9P2W1 217 aaPredicted RBP13.05□□□□□ -0.32
VMP1-206ENST00000587945 FETUBQ9UGM5 382 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 FBXL2Q9UKC9 423 aa13.05□□□□□ -0.32
VMP1-206ENST00000587945 MBD3L4A6NDZ8 208 aaPredicted RBP13.04□□□□□ -0.32
VMP1-206ENST00000587945 MBD3L3A6NE82 208 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms